{"info":{"_postman_id":"462525e3-526a-4701-887e-f2c370c51029","name":"Listenfield Breeding API","description":"

Listenfield Breeding API is based on The Breeding API (BrAPI). A Standardized RESTful Web Service API Specification for communicating Plant Breeding Data. Our API allows for easy data sharing between databases and tools involved in plant breeding.

\n","schema":"https://schema.getpostman.com/json/collection/v2.0.0/collection.json","toc":[],"owner":"3058444","collectionId":"462525e3-526a-4701-887e-f2c370c51029","publishedId":"RznLGGUN","public":true,"customColor":{"top-bar":"FFFFFF","right-sidebar":"323040","highlight":"1790D8"},"publishDate":"2019-01-17T13:03:10.000Z"},"item":[{"name":"allelematrices-search","item":[{"name":"Get the a Matrix of Allele data","id":"2bffcbb1-8597-4c43-9eb2-5603554cf8ee","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/allelematrices-search?markerprofileDbId=&markerprofileDbId=&markerProfileDbId=&markerProfileDbId=&markerDbId=&markerDbId=&matrixDbId=&matrixDbId=&format=&expandHomozygotes=&unknownString=&sepPhased=&sepUnphased=&page=&pageSize=","description":"

See Search Services for additional implementation details.

\n

This uses a more efficient data structure and pagination for large number of markers.

\n

See Search Services for additional implementation details.

\n

Use GET when parameter size is less than 2K bytes.

\n

This method may support asynchronous processing.

\n","urlObject":{"path":["allelematrices-search"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

DEPRECATED in v1.3 - see \"markerProfileDbId\" (camel case)

\n","type":"text/plain"},"key":"markerprofileDbId","value":""},{"description":{"content":"

DEPRECATED in v1.3 - see \"markerProfileDbId\" (camel case)

\n","type":"text/plain"},"key":"markerprofileDbId","value":""},{"description":{"content":"

The marker Profile db ids. Not Required if 'markerDbId' or 'matrixDbId' is present.

\n","type":"text/plain"},"key":"markerProfileDbId","value":""},{"description":{"content":"

The marker Profile db ids. Not Required if 'markerDbId' or 'matrixDbId' is present.

\n","type":"text/plain"},"key":"markerProfileDbId","value":""},{"description":{"content":"

ids of the markers. if none are specified, results are returned for all markers in the database. Not Required if 'markerProfileDbId' or 'matrixDbId' is present.

\n","type":"text/plain"},"key":"markerDbId","value":""},{"description":{"content":"

ids of the markers. if none are specified, results are returned for all markers in the database. Not Required if 'markerProfileDbId' or 'matrixDbId' is present.

\n","type":"text/plain"},"key":"markerDbId","value":""},{"key":"matrixDbId","value":""},{"key":"matrixDbId","value":""},{"description":{"content":"

format for the datafile to be downloaded. tsv and csv currently supported; flapjack may be supported.

\n","type":"text/plain"},"key":"format","value":""},{"description":{"content":"

Should homozygotes NOT be collapsed into a single occurrence?

\n","type":"text/plain"},"key":"expandHomozygotes","value":""},{"description":{"content":"

The string to use as a representation for missing data or the reserved word \"empty_string\".

\n","type":"text/plain"},"key":"unknownString","value":""},{"description":{"content":"

The string to use as a separator for phased allele calls or the reserved word \"empty_string\".

\n","type":"text/plain"},"key":"sepPhased","value":""},{"description":{"content":"

The string to use as a separator for unphased allele calls or the reserved word \"empty_string\".

\n","type":"text/plain"},"key":"sepUnphased","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"4d95d696-4d1d-4022-984b-4e0bde0d5fca","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/allelematrices-search?markerprofileDbId=&markerprofileDbId=&markerProfileDbId=&markerProfileDbId=&markerDbId=&markerDbId=&matrixDbId=&matrixDbId=&format=&expandHomozygotes=&unknownString=&sepPhased=&sepUnphased=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["allelematrices-search"],"query":[{"key":"markerprofileDbId","value":""},{"key":"markerprofileDbId","value":""},{"key":"markerProfileDbId","value":""},{"key":"markerProfileDbId","value":""},{"key":"markerDbId","value":""},{"key":"markerDbId","value":""},{"key":"matrixDbId","value":""},{"key":"matrixDbId","value":""},{"key":"format","value":""},{"key":"expandHomozygotes","value":""},{"key":"unknownString","value":""},{"key":"sepPhased","value":""},{"key":"sepUnphased","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"8cfa2c28-f0fa-405e-877f-816dce3290ad","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/allelematrices-search?markerprofileDbId=&markerprofileDbId=&markerProfileDbId=&markerProfileDbId=&markerDbId=&markerDbId=&matrixDbId=&matrixDbId=&format=&expandHomozygotes=&unknownString=&sepPhased=&sepUnphased=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["allelematrices-search"],"query":[{"key":"markerprofileDbId","value":""},{"key":"markerprofileDbId","value":""},{"key":"markerProfileDbId","value":""},{"key":"markerProfileDbId","value":""},{"key":"markerDbId","value":""},{"key":"markerDbId","value":""},{"key":"matrixDbId","value":""},{"key":"matrixDbId","value":""},{"key":"format","value":""},{"key":"expandHomozygotes","value":""},{"key":"unknownString","value":""},{"key":"sepPhased","value":""},{"key":"sepUnphased","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"c6ef0b8a-8e55-47a5-b3c5-af1236bab53b","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/allelematrices-search?markerprofileDbId=&markerprofileDbId=&markerProfileDbId=&markerProfileDbId=&markerDbId=&markerDbId=&matrixDbId=&matrixDbId=&format=&expandHomozygotes=&unknownString=&sepPhased=&sepUnphased=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["allelematrices-search"],"query":[{"key":"markerprofileDbId","value":""},{"key":"markerprofileDbId","value":""},{"key":"markerProfileDbId","value":""},{"key":"markerProfileDbId","value":""},{"key":"markerDbId","value":""},{"key":"markerDbId","value":""},{"key":"matrixDbId","value":""},{"key":"matrixDbId","value":""},{"key":"format","value":""},{"key":"expandHomozygotes","value":""},{"key":"unknownString","value":""},{"key":"sepPhased","value":""},{"key":"sepUnphased","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"e7f6b6f8-8a8a-48ef-9c3f-22fb395c52c2","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/allelematrices-search?markerprofileDbId=&markerprofileDbId=&markerProfileDbId=&markerProfileDbId=&markerDbId=&markerDbId=&matrixDbId=&matrixDbId=&format=&expandHomozygotes=&unknownString=&sepPhased=&sepUnphased=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["allelematrices-search"],"query":[{"key":"markerprofileDbId","value":""},{"key":"markerprofileDbId","value":""},{"key":"markerProfileDbId","value":""},{"key":"markerProfileDbId","value":""},{"key":"markerDbId","value":""},{"key":"markerDbId","value":""},{"key":"matrixDbId","value":""},{"key":"matrixDbId","value":""},{"key":"format","value":""},{"key":"expandHomozygotes","value":""},{"key":"unknownString","value":""},{"key":"sepPhased","value":""},{"key":"sepUnphased","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 280,\n \"totalPages\": 140\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n [\n \"mr01\",\n \"P1\",\n \"A\"\n ],\n [\n \"mr02\",\n \"P1\",\n \"C\"\n ]\n ]\n }\n}"}],"_postman_id":"2bffcbb1-8597-4c43-9eb2-5603554cf8ee"},{"name":"Submit a request to get a Matrix of Allele data","id":"3080d283-dc74-44c5-88e2-ad97f22d56f0","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"POST","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"expandHomozygotes\": \"\",\n \"format\": \"\",\n \"markerDbId\": [\n \"\",\n \"\"\n ],\n \"markerProfileDbId\": [\n \"\",\n \"\"\n ],\n \"markerprofileDbId\": [\n \"\",\n \"\"\n ],\n \"matrixDbId\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\",\n \"sepPhased\": \"\",\n \"sepUnphased\": \"\",\n \"unknownString\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/allelematrices-search","description":"

See Search Services for additional implementation details.

\n

This uses a more efficient data structure and pagination for large number of markers.

\n

Use POST when parameter size is greater than 2K bytes.

\n
    \n

  • If no format is specified, this call returns the data in JSON form.

    \n
    • \n

  • If a format (other than JSON) is specified and the server supports this format, it will return the link to the exported data file in the \"datafiles\" field of the \"metadata\".

    \n
    • \n

  • If more than one format is requested at a time, the server will throw a \"501 Not Implemented\" error.

    \n
    • \n
\n

The format of the tsv response can be found on GitHub (https://github.com/plantbreeding/Documentation/wiki/BrAPI-TSV-Expected-Formats)'

\n","urlObject":{"path":["allelematrices-search"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[]}},"response":[{"id":"023ac207-d248-4f73-9347-a5fa3d23b5d4","name":"OK","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"expandHomozygotes\": \"\",\n \"format\": \"\",\n \"markerDbId\": [\n \"\",\n \"\"\n ],\n \"markerProfileDbId\": [\n \"\",\n \"\"\n ],\n \"markerprofileDbId\": [\n \"\",\n \"\"\n ],\n \"matrixDbId\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\",\n \"sepPhased\": \"\",\n \"sepUnphased\": \"\",\n \"unknownString\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/allelematrices-search"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"asynchStatus\": {\n \"asynchId\": \"\",\n \"endTime\": \"2018-12-05T00:00:00.000Z\",\n \"percentComplete\": 100,\n \"startTime\": \"2018-12-05T00:00:00.000Z\",\n \"status\": \"FINISHED\"\n },\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 280,\n \"totalPages\": 140\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n [\n \"mr01\",\n \"P1\",\n \"A\"\n ],\n [\n \"mr02\",\n \"P1\",\n \"C\"\n ]\n ]\n }\n}"},{"id":"0488becf-1c97-4729-9a18-7facfd7e0404","name":"Bad Request","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"expandHomozygotes\": \"\",\n \"format\": \"\",\n \"markerDbId\": [\n \"\",\n \"\"\n ],\n \"markerProfileDbId\": [\n \"\",\n \"\"\n ],\n \"markerprofileDbId\": [\n \"\",\n \"\"\n ],\n \"matrixDbId\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\",\n \"sepPhased\": \"\",\n \"sepUnphased\": \"\",\n \"unknownString\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/allelematrices-search"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"1da2e77e-e4fc-4f2b-8e14-1737acdcb99c","name":"Unauthorized","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"expandHomozygotes\": \"\",\n \"format\": \"\",\n \"markerDbId\": [\n \"\",\n \"\"\n ],\n \"markerProfileDbId\": [\n \"\",\n \"\"\n ],\n \"markerprofileDbId\": [\n \"\",\n \"\"\n ],\n \"matrixDbId\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\",\n \"sepPhased\": \"\",\n \"sepUnphased\": \"\",\n \"unknownString\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/allelematrices-search"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"655dbfa6-25c7-4b18-a45f-9244e4f3bb59","name":"Forbidden","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"expandHomozygotes\": \"\",\n \"format\": \"\",\n \"markerDbId\": [\n \"\",\n \"\"\n ],\n \"markerProfileDbId\": [\n \"\",\n \"\"\n ],\n \"markerprofileDbId\": [\n \"\",\n \"\"\n ],\n \"matrixDbId\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\",\n \"sepPhased\": \"\",\n \"sepUnphased\": \"\",\n \"unknownString\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/allelematrices-search"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""}],"_postman_id":"3080d283-dc74-44c5-88e2-ad97f22d56f0"}],"id":"1d8041e6-6454-4fb7-b712-fbc900c82a0a","_postman_id":"1d8041e6-6454-4fb7-b712-fbc900c82a0a","description":""},{"name":"allelematrix-search","item":[{"name":"Scores through GET","id":"f08669d2-f189-4c86-827b-a1c52870d52c","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[],"url":"https://test-server.brapi.org/brapi/v1/allelematrix-search?markerprofileDbId=&markerprofileDbId=&markerDbId=&markerDbId=&matrixDbId=&matrixDbId=&format=&expandHomozygotes=&unknownString=&sepPhased=&sepUnphased=&page=&pageSize=","description":"

Status: ACCEPTED.

\n

Implemented by: Germinate (POST only), Cassavabase

\n

Used by: Flapjack (POST only)

\n

See Search Services for additional implementation details.

\n

This uses a more efficient data structure and pagination for large number of markers.

\n

See Search Services for additional implementation details.

\n

This uses a more efficient data structure and pagination for large number of markers.

\n

Use GET when parameter size is less than 2K bytes.\nThis method may support asynchronous processing.

\n","urlObject":{"path":["allelematrix-search"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

The marker profile db ids. Not Required if 'markerDbId' or 'matrixDbId' is present.

\n","type":"text/plain"},"key":"markerprofileDbId","value":""},{"description":{"content":"

The marker profile db ids. Not Required if 'markerDbId' or 'matrixDbId' is present.

\n","type":"text/plain"},"key":"markerprofileDbId","value":""},{"description":{"content":"

ids of the markers. if none are specified, results are returned for all markers in the database. Not Required if 'markerprofileDbId' or 'matrixDbId' is present.

\n","type":"text/plain"},"key":"markerDbId","value":""},{"description":{"content":"

ids of the markers. if none are specified, results are returned for all markers in the database. Not Required if 'markerprofileDbId' or 'matrixDbId' is present.

\n","type":"text/plain"},"key":"markerDbId","value":""},{"key":"matrixDbId","value":""},{"key":"matrixDbId","value":""},{"description":{"content":"

format for the datafile to be downloaded. tsv and csv currently supported; flapjack may be supported.

\n","type":"text/plain"},"key":"format","value":""},{"description":{"content":"

Should homozygotes NOT be collapsed into a single occurrence?

\n","type":"text/plain"},"key":"expandHomozygotes","value":""},{"description":{"content":"

The string to use as a representation for missing data or the reserved word \"empty_string\".

\n","type":"text/plain"},"key":"unknownString","value":""},{"description":{"content":"

The string to use as a separator for phased allele calls or the reserved word \"empty_string\".

\n","type":"text/plain"},"key":"sepPhased","value":""},{"description":{"content":"

The string to use as a separator for unphased allele calls or the reserved word \"empty_string\".

\n","type":"text/plain"},"key":"sepUnphased","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"9147db54-c276-4186-962a-e83e1505b60f","name":"OK","originalRequest":{"method":"GET","header":[],"url":{"raw":"https://test-server.brapi.org/brapi/v1/allelematrix-search?markerprofileDbId=&markerprofileDbId=&markerDbId=&markerDbId=&matrixDbId=&matrixDbId=&format=&expandHomozygotes=&unknownString=&sepPhased=&sepUnphased=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["allelematrix-search"],"query":[{"key":"markerprofileDbId","value":""},{"key":"markerprofileDbId","value":""},{"key":"markerDbId","value":""},{"key":"markerDbId","value":""},{"key":"matrixDbId","value":""},{"key":"matrixDbId","value":""},{"key":"format","value":""},{"key":"expandHomozygotes","value":""},{"key":"unknownString","value":""},{"key":"sepPhased","value":""},{"key":"sepUnphased","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"asynchStatus\": {\n \"asynchId\": \"\",\n \"endTime\": \"2018-12-05T00:00:00.000Z\",\n \"percentComplete\": 100,\n \"startTime\": \"2018-12-05T00:00:00.000Z\",\n \"status\": \"FINISHED\"\n },\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 280,\n \"totalPages\": 140\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n [\n \"mr01\",\n \"P1\",\n \"A\"\n ],\n [\n \"mr02\",\n \"P1\",\n \"C\"\n ]\n ]\n }\n}"}],"_postman_id":"f08669d2-f189-4c86-827b-a1c52870d52c"},{"name":"Scores through POST","id":"d46e2ea8-c31f-4c3e-bd39-133dd0b9e4ec","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"POST","header":[{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"expandHomozygotes\": \"\",\n \"format\": \"\",\n \"markerDbId\": [\n \"\",\n \"\"\n ],\n \"markerProfileDbId\": [\n \"\",\n \"\"\n ],\n \"markerprofileDbId\": [\n \"\",\n \"\"\n ],\n \"matrixDbId\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\",\n \"sepPhased\": \"\",\n \"sepUnphased\": \"\",\n \"unknownString\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/allelematrix-search","description":"

Status: ACCEPTED.

\n

Implemented by: Germinate (POST only), Cassavabase

\n

Used by: Flapjack (POST only)

\n

See Search Services for additional implementation details.

\n

This uses a more efficient data structure and pagination for large number of markers.

\n

Use POST when parameter size is greater than 2K bytes.

\n
    \n

  • If no format is specified, this call returns the data in JSON form.

    \n
    • \n

  • If a format (other than JSON) is specified and the server supports this format, it will return the link to the exported data file in the \"datafiles\" field of the \"metadata\".

    \n
    • \n

  • If more than one format is requested at a time, the server will throw a \"501 Not Implemented\" error.

    \n
    • \n
\n

The format of the tsv response can be found on GitHub (https://github.com/plantbreeding/Documentation/wiki/BrAPI-TSV-Expected-Formats)

\n","urlObject":{"path":["allelematrix-search"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[]}},"response":[{"id":"e2417f64-a054-4438-8ed8-f2aa4ca29605","name":"OK","originalRequest":{"method":"POST","header":[{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"expandHomozygotes\": \"\",\n \"format\": \"\",\n \"markerDbId\": [\n \"\",\n \"\"\n ],\n \"markerProfileDbId\": [\n \"\",\n \"\"\n ],\n \"markerprofileDbId\": [\n \"\",\n \"\"\n ],\n \"matrixDbId\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\",\n \"sepPhased\": \"\",\n \"sepUnphased\": \"\",\n \"unknownString\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/allelematrix-search"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 1000,\n 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HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

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List available attributes.

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Unique identifier for the general category for the attribute. very similar to Trait class.

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Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

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The size of the pages to be returned. Default is 1000.

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HTTP HEADER - Token used for Authorization

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Bearer {token_string}

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Get the list of germplasm breeding methods available in a system.

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The size of the pages to be returned. Default is 1000.

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HTTP HEADER - Token used for Authorization

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Bearer {token_string}

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Get the details of a specific Breeding Method used to produce Germplasm

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HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

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Germplasm Details by germplasmDbId was merged with Germplasm Multi Crop Passport Data. The MCPD fields are optional and marked with the prefix [MCPD].

\n","urlObject":{"path":["germplasm",":germplasmDbId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

The internal id of the germplasm

\n","type":"text/plain"},"type":"any","value":"","key":"germplasmDbId"}]}},"response":[{"id":"49b590ab-c4f5-4bef-92cd-eb9e535716da","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm/"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"4b7094ec-767c-4676-b7b8-67cb7a217a11","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm/"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"accessionNumber\": \"A000003\",\n \"acquisitionDate\": \"2001-01-01T00:00:00.000Z\",\n \"biologicalStatusOfAccessionCode\": 500,\n \"breedingMethodDbId\": \"bm1\",\n \"commonCropName\": \"G000003\",\n \"countryOfOriginCode\": \"COUNTRY1\",\n \"defaultDisplayName\": \"G000003\",\n \"documentationURL\": \"https://brapi.org\",\n \"donors\": [],\n \"genus\": \"Fructus\",\n \"germplasmDbId\": \"3\",\n \"germplasmGenus\": \"Fructus\",\n \"germplasmName\": \"Name003\",\n \"germplasmPUI\": \"http://pui.per/accession/A000003\",\n \"germplasmSpecies\": \"novus\",\n \"instituteCode\": \"PER001\",\n \"instituteName\": \"INST1\",\n \"pedigree\": \"A000001/A000002\",\n \"seedSource\": \"A000001/A000002\",\n \"species\": \"novus\",\n \"speciesAuthority\": \"L\",\n \"subtaxa\": \"subtaxa\",\n \"subtaxaAuthority\": \"N\",\n \"synonyms\": [\n \"variety 1\"\n ],\n \"taxonIds\": [\n {\n \"sourceName\": \"ncbiTaxon\",\n \"taxonId\": \"2340\"\n },\n {\n \"sourceName\": \"ciradTaxon\",\n \"taxonId\": \"E312\"\n }\n ],\n \"typeOfGermplasmStorageCode\": []\n }\n}"},{"id":"6120fd67-d4a7-4ddd-8e93-c3ff408ea820","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm/"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"c4817bea-b46a-4095-9839-abc2960877b7","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm/"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"c91fff2d-9098-4f86-a727-2d3d5f820694","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm/"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""}],"_postman_id":"55315f8f-85a7-435d-b2c2-f8a99f0b25fa"},{"name":"Get the Germplasm Attributes associated with a specific Germplasm","id":"d80014ed-7a43-43d6-b864-8dea745cc950","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/germplasm/:germplasmDbId/attributes?attributeDbIds=&attributeDbIds=&attributeList=&attributeList=&page=&pageSize=","description":"

Values for all attributes by default.

\n","urlObject":{"path":["germplasm",":germplasmDbId","attributes"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Restrict the response to only the listed attributeDbIds.

\n","type":"text/plain"},"key":"attributeDbIds","value":""},{"description":{"content":"

Restrict the response to only the listed attributeDbIds.

\n","type":"text/plain"},"key":"attributeDbIds","value":""},{"description":{"content":"

Deprecated Use \"attributeDbIds\" instead

\n","type":"text/plain"},"key":"attributeList","value":""},{"description":{"content":"

Deprecated Use \"attributeDbIds\" instead

\n","type":"text/plain"},"key":"attributeList","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[{"description":{"content":"

The germplasm characterized

\n","type":"text/plain"},"type":"any","value":"","key":"germplasmDbId"}]}},"response":[{"id":"68c20650-df78-49dc-bf5c-6aa1b4e3ac7a","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/germplasm//attributes?attributeDbIds=&attributeDbIds=&attributeList=&attributeList=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["germplasm","","attributes"],"query":[{"key":"attributeDbIds","value":""},{"key":"attributeDbIds","value":""},{"key":"attributeList","value":""},{"key":"attributeList","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"936fff9c-39c9-457a-9315-33871c812960","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/germplasm//attributes?attributeDbIds=&attributeDbIds=&attributeList=&attributeList=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["germplasm","","attributes"],"query":[{"key":"attributeDbIds","value":""},{"key":"attributeDbIds","value":""},{"key":"attributeList","value":""},{"key":"attributeList","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"b8539a3e-c57f-4558-9736-128fd1b469e5","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/germplasm//attributes?attributeDbIds=&attributeDbIds=&attributeList=&attributeList=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["germplasm","","attributes"],"query":[{"key":"attributeDbIds","value":""},{"key":"attributeDbIds","value":""},{"key":"attributeList","value":""},{"key":"attributeList","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 5,\n \"totalPages\": 3\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"attributeCode\": \"RHT\",\n \"attributeDbId\": \"ATT01\",\n \"attributeName\": \"Rht-B1b\",\n \"determinedDate\": \"2017-03-17T00:00:00.000Z\",\n \"value\": \"Heterozygous\"\n },\n {\n \"attributeCode\": \"WEV\",\n \"attributeDbId\": \"ATT02\",\n \"attributeName\": \"Weevil Resistance\",\n \"determinedDate\": \"2017-03-17T00:00:00.000Z\",\n \"value\": \"Present\"\n }\n ],\n \"germplasmDbId\": \"3\"\n }\n}"},{"id":"ba94de4d-b081-487e-92ed-4b3024707f7c","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/germplasm//attributes?attributeDbIds=&attributeDbIds=&attributeList=&attributeList=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["germplasm","","attributes"],"query":[{"key":"attributeDbIds","value":""},{"key":"attributeDbIds","value":""},{"key":"attributeList","value":""},{"key":"attributeList","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"d7f06acf-a9e4-400a-b9c5-1814443e4d03","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/germplasm//attributes?attributeDbIds=&attributeDbIds=&attributeList=&attributeList=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["germplasm","","attributes"],"query":[{"key":"attributeDbIds","value":""},{"key":"attributeDbIds","value":""},{"key":"attributeList","value":""},{"key":"attributeList","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""}],"_postman_id":"d80014ed-7a43-43d6-b864-8dea745cc950"},{"name":"Get the Marker Profiles associated with a specific Germplasm","id":"fef7ac55-1b45-4a2a-9cc6-4c7f4ddd5c0f","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/germplasm/:germplasmDbId/markerprofiles","description":"

Retrieve the markerProfileDbIds for a given Germplasm ID

\n","urlObject":{"path":["germplasm",":germplasmDbId","markerprofiles"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

the internal id of the germplasm

\n","type":"text/plain"},"type":"any","value":"","key":"germplasmDbId"}]}},"response":[{"id":"055c2e6d-c698-4ad2-9a0a-0863b137a38d","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm//markerprofiles"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"6d9afe98-a8c8-486c-bdfd-1e3f13c3bf1d","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm//markerprofiles"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"7d1b19a8-f09a-4c4f-93eb-df339c8a523d","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm//markerprofiles"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"b4e2c10d-18ed-4cff-bc3e-d0002fd39d17","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm//markerprofiles"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"germplasmDbId\": \"3\",\n \"markerProfileDbIds\": [\n \"G3-P2\"\n ],\n \"markerprofileDbIds\": [\n \"G3-P2\"\n ]\n }\n}"},{"id":"fcaf8570-6e0b-4f15-85a5-517134ede9be","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm//markerprofiles"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""}],"_postman_id":"fef7ac55-1b45-4a2a-9cc6-4c7f4ddd5c0f"},{"name":"Get the details of a specifc Germplasm in MCPD format","id":"58d9eb3f-2a2f-4e65-a88c-5ece043ec54d","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/germplasm/:germplasmDbId/mcpd","description":"

Get all MCPD details of a germplasm

\n

MCPD v2.1 spec can be found here

\n

Implementation Notes

\n
    \n
  • When the MCPD spec identifies a field which can have multiple values returned, the JSON response should be an array instead of a semi-colon seperated string.
    • \n
\n","urlObject":{"path":["germplasm",":germplasmDbId","mcpd"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

the internal id of the germplasm

\n","type":"text/plain"},"type":"any","value":"","key":"germplasmDbId"}]}},"response":[{"id":"0f66b26e-80b5-4234-b987-3f019a95d83c","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm//mcpd"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"118fe422-a7b6-40cc-b3dd-707b923b276a","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm//mcpd"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"16a6d080-8ff1-4ed4-822f-093a78a41850","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm//mcpd"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"1ed0f825-3de6-47b6-aac7-646ee94d8f59","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm//mcpd"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"accessionNames\": [\n \"Name003\"\n ],\n \"accessionNumber\": \"A000003\",\n \"acquisitionDate\": \"2001-01-01T00:00:00.000Z\",\n \"acquisitionSourceCode\": \"11\",\n \"alternateIDs\": [\n \"3\",\n \"http://pui.per/accession/A000003\",\n \"A000003\"\n ],\n \"ancestralData\": \"A000001/A000002\",\n \"biologicalStatusOfAccessionCode\": \"500\",\n \"breedingInstitutes\": [\n {\n \"instituteCode\": \"PER001\",\n \"instituteName\": \"INST1\"\n }\n ],\n \"collectingInfo\": {\n \"collectingDate\": \"2001-01-01T00:00:00.000Z\",\n \"collectingInstitutes\": [\n {\n \"instituteAddress\": \"INST1\",\n \"instituteCode\": \"PER001\",\n \"instituteName\": \"INST1\"\n }\n ],\n \"collectingMissionIdentifier\": \"3\",\n \"collectingNumber\": \"A000003\",\n \"collectingSite\": {\n \"coordinateUncertainty\": \"20m\",\n \"elevation\": \"20m\",\n \"georeferencingMethod\": \"WGS84\",\n \"latitudeDecimal\": 42.445295,\n \"latitudeDegrees\": \"42 26 43.1 N\",\n \"locationDescription\": \"INST1\",\n \"longitudeDecimal\": \"-076.471934\",\n \"longitudeDegrees\": \"76 28 19.0 W\",\n \"spatialReferenceSystem\": \"WGS84\"\n }\n },\n \"commonCropName\": \"G000003\",\n \"countryOfOrigin\": \"COUNTRY1\",\n \"donorInfo\": {\n \"donorAccessionNumber\": \"A000003\",\n \"donorInstitute\": {\n \"instituteCode\": \"PER001\",\n \"instituteName\": \"INST1\"\n }\n },\n \"genus\": \"Fructus\",\n \"germplasmDbId\": \"3\",\n \"germplasmPUI\": \"http://pui.per/accession/A000003\",\n \"instituteCode\": \"PER001\",\n \"mlsStatus\": \"0\",\n \"remarks\": \"G000003\",\n \"safetyDuplicateInstitues\": [\n {\n \"instituteCode\": \"PER001\",\n \"instituteName\": \"INST1\"\n }\n ],\n \"species\": \"novus\",\n \"speciesAuthority\": \"L\",\n \"storageTypeCodes\": [],\n \"subtaxon\": \"subtaxa\",\n \"subtaxonAuthority\": \"N\"\n }\n}"},{"id":"f73e1451-999e-4042-b443-4e2763e3e3b9","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm//mcpd"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""}],"_postman_id":"58d9eb3f-2a2f-4e65-a88c-5ece043ec54d"},{"name":"Get the pedigree details of a specific Germplasm","id":"d61002cd-f5e1-4373-be16-588be2cda9bf","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/germplasm/:germplasmDbId/pedigree?notation=&includeSiblings=","description":"

Get the parentage information of a specific Germplasm

\n","urlObject":{"path":["germplasm",":germplasmDbId","pedigree"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

text representation of the pedigree

\n","type":"text/plain"},"key":"notation","value":""},{"description":{"content":"

include array of siblings in response

\n","type":"text/plain"},"key":"includeSiblings","value":""}],"variable":[{"description":{"content":"

the internal id of the germplasm

\n","type":"text/plain"},"type":"any","value":"","key":"germplasmDbId"}]}},"response":[{"id":"39369d5b-11f7-424e-8287-6a64aa19e872","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/germplasm//pedigree?notation=&includeSiblings=","host":["https://test-server.brapi.org/brapi/v1"],"path":["germplasm","","pedigree"],"query":[{"key":"notation","value":""},{"key":"includeSiblings","value":""}]}},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"9aec564f-49de-495e-a9c9-ab4cee1ddc80","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - 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2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"a95eb692-672d-4351-a31b-fbb4a898cb69","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/germplasm//pedigree?notation=&includeSiblings=","host":["https://test-server.brapi.org/brapi/v1"],"path":["germplasm","","pedigree"],"query":[{"key":"notation","value":""},{"key":"includeSiblings","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"crossingPlan\": \"OPEN_POLLINATION\",\n \"crossingYear\": \"2018\",\n \"defaultDisplayName\": \"G000003\",\n \"familyCode\": \"Cree_x_Bonanza_2018\",\n \"germplasmDbId\": \"3\",\n \"parent1DbId\": \"1\",\n \"parent1Id\": \"1\",\n \"parent1Name\": \"G000001\",\n \"parent1Type\": \"FEMALE\",\n \"parent2DbId\": \"2\",\n \"parent2Id\": \"2\",\n \"parent2Name\": \"G000002\",\n \"parent2Type\": \"MALE\",\n \"pedigree\": \"A000001/A000002\",\n \"siblings\": []\n }\n}"},{"id":"deafc9e8-0fd2-4dfe-bb5e-f4908d83f089","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/germplasm//pedigree?notation=&includeSiblings=","host":["https://test-server.brapi.org/brapi/v1"],"path":["germplasm","","pedigree"],"query":[{"key":"notation","value":""},{"key":"includeSiblings","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""}],"_postman_id":"d61002cd-f5e1-4373-be16-588be2cda9bf"},{"name":"Get the progeny details of a specific Germplasm","id":"d44d651d-7ca4-48ce-8198-23e900af27d6","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/germplasm/:germplasmDbId/progeny","description":"

Get the germplasmDbIds for all the Progeny of a particular germplasm.

\n

Implementation Notes

\n
    \n
  • Regarding the 'parentType' field in the progeny object. Given a germplasm A having a progeny B and C, 'parentType' for progeny B refers to the 'parentType' of A toward B.
    • \n
\n","urlObject":{"path":["germplasm",":germplasmDbId","progeny"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

the internal id of the germplasm

\n","type":"text/plain"},"type":"any","value":"","key":"germplasmDbId"}]}},"response":[{"id":"044ad698-8f11-4efd-9806-e69d43f14750","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm//progeny"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"0787a497-0adc-4858-8601-968412d99593","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm//progeny"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"defaultDisplayName\": \"G000002\",\n \"germplasmDbId\": \"3\",\n \"progeny\": [\n {\n \"defaultDisplayName\": \"G000004\",\n \"germplasmDbId\": \"4\",\n \"parentType\": \"MALE\"\n },\n {\n \"defaultDisplayName\": \"G000005\",\n \"germplasmDbId\": \"5\",\n \"parentType\": \"MALE\"\n },\n {\n \"defaultDisplayName\": \"G000006\",\n \"germplasmDbId\": \"6\",\n \"parentType\": \"MALE\"\n }\n ]\n }\n}"},{"id":"4200d14c-6465-49e3-8cf7-77638110b327","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm//progeny"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"d4271880-b7a6-4a22-acf6-9570497b2751","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm//progeny"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"df5d4e6c-cddc-4f86-a342-ce1a253744a8","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/germplasm//progeny"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""}],"_postman_id":"d44d651d-7ca4-48ce-8198-23e900af27d6"}],"id":"bacc231a-0de1-4102-af04-0800c14eeab8","_postman_id":"bacc231a-0de1-4102-af04-0800c14eeab8","description":""},{"name":"Get the Germplasm","id":"048daa69-2827-4897-8653-a643d2388fd2","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/germplasm?germplasmPUI=&germplasmDbId=&germplasmName=&commonCropName=&page=&pageSize=","description":"

Addresses these needs

\n
    \n

  • General germplasm search mechanism that accepts POST for complex queries

    \n
    • \n

  • Possibility to search germplasm by more parameters than those allowed by the existing germplasm search

    \n
    • \n

  • Possibility to get MCPD details by PUID rather than dbId

    \n
    • \n
\n","urlObject":{"path":["germplasm"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Permanent unique identifier (DOI, URI, etc.)

\n","type":"text/plain"},"key":"germplasmPUI","value":""},{"description":{"content":"

Internal database identifier

\n","type":"text/plain"},"key":"germplasmDbId","value":""},{"description":{"content":"

Name of the germplasm

\n","type":"text/plain"},"key":"germplasmName","value":""},{"description":{"content":"

The common crop name related to this germplasm

\n","type":"text/plain"},"key":"commonCropName","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"156aff25-5ffb-445f-94e9-8128811f6fac","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/germplasm?germplasmPUI=&germplasmDbId=&germplasmName=&commonCropName=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["germplasm"],"query":[{"key":"germplasmPUI","value":""},{"key":"germplasmDbId","value":""},{"key":"germplasmName","value":""},{"key":"commonCropName","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"2bd0e3ed-b842-4024-b329-30508e4ce9c3","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/germplasm?germplasmPUI=&germplasmDbId=&germplasmName=&commonCropName=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["germplasm"],"query":[{"key":"germplasmPUI","value":""},{"key":"germplasmDbId","value":""},{"key":"germplasmName","value":""},{"key":"commonCropName","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"6b76fa39-a8b2-40f8-8031-28b023075e25","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/germplasm?germplasmPUI=&germplasmDbId=&germplasmName=&commonCropName=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["germplasm"],"query":[{"key":"germplasmPUI","value":""},{"key":"germplasmDbId","value":""},{"key":"germplasmName","value":""},{"key":"commonCropName","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 2,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"accessionNumber\": \"A000003\",\n \"acquisitionDate\": \"2001-01-01T00:00:00.000Z\",\n \"biologicalStatusOfAccessionCode\": 500,\n \"breedingMethodDbId\": \"bm1\",\n \"commonCropName\": \"G000003\",\n \"countryOfOriginCode\": \"COUNTRY1\",\n \"defaultDisplayName\": \"G000003\",\n \"documentationURL\": \"https://brapi.org\",\n \"donors\": [],\n \"genus\": \"Fructus\",\n \"germplasmDbId\": \"3\",\n \"germplasmGenus\": \"Fructus\",\n \"germplasmName\": \"Name003\",\n \"germplasmPUI\": \"http://pui.per/accession/A000003\",\n \"germplasmSpecies\": \"novus\",\n \"instituteCode\": \"PER001\",\n \"instituteName\": \"INST1\",\n \"pedigree\": \"A000001/A000002\",\n \"seedSource\": \"A000001/A000002\",\n \"species\": \"novus\",\n \"speciesAuthority\": \"L\",\n \"subtaxa\": \"subtaxa\",\n \"subtaxaAuthority\": \"N\",\n \"synonyms\": [\n \"variety 1\"\n ],\n \"taxonIds\": [\n {\n \"sourceName\": \"ncbiTaxon\",\n \"taxonId\": \"2340\"\n },\n {\n \"sourceName\": \"ciradTaxon\",\n \"taxonId\": \"E312\"\n }\n ],\n \"typeOfGermplasmStorageCode\": []\n },\n {\n \"accessionNumber\": \"A000004\",\n \"acquisitionDate\": \"2001-01-01T00:00:00.000Z\",\n \"biologicalStatusOfAccessionCode\": 500,\n \"breedingMethodDbId\": \"bm1\",\n \"commonCropName\": \"G000004\",\n \"countryOfOriginCode\": \"COUNTRY1\",\n \"defaultDisplayName\": \"G000004\",\n \"documentationURL\": \"https://brapi.org\",\n \"donors\": [],\n \"genus\": \"Fructus\",\n \"germplasmDbId\": \"4\",\n \"germplasmGenus\": \"Fructus\",\n \"germplasmName\": \"Name004\",\n \"germplasmPUI\": \"http://pui.per/accession/A000004\",\n \"germplasmSpecies\": \"novus\",\n \"instituteCode\": \"PER001\",\n \"instituteName\": \"INST1\",\n \"pedigree\": \"A000001/A000003\",\n \"seedSource\": \"open pollination\",\n \"species\": \"novus\",\n \"speciesAuthority\": \"L\",\n \"subtaxa\": \"subtaxa\",\n \"subtaxaAuthority\": \"N\",\n \"synonyms\": [\n \"variety 4\"\n ],\n \"taxonIds\": [\n {\n \"sourceName\": \"ncbiTaxon\",\n \"taxonId\": \"2340\"\n },\n {\n \"sourceName\": \"ciradTaxon\",\n \"taxonId\": \"E312\"\n }\n ],\n \"typeOfGermplasmStorageCode\": []\n }\n ]\n }\n}"},{"id":"b47abf20-d2a1-4a1c-a2b7-d7c9013723e0","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/germplasm?germplasmPUI=&germplasmDbId=&germplasmName=&commonCropName=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["germplasm"],"query":[{"key":"germplasmPUI","value":""},{"key":"germplasmDbId","value":""},{"key":"germplasmName","value":""},{"key":"commonCropName","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""}],"_postman_id":"048daa69-2827-4897-8653-a643d2388fd2"}],"id":"5dcb9f13-c398-419d-a574-c23d098515a9","_postman_id":"5dcb9f13-c398-419d-a574-c23d098515a9","description":""},{"name":"germplasm-search","item":[{"name":"Germplasm search through GET","id":"914322e1-daab-4637-ad6c-4fc16e9f6e9a","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[],"url":"https://test-server.brapi.org/brapi/v1/germplasm-search?germplasmPUI=&germplasmDbId=&germplasmName=&commonCropName=&page=&pageSize=","description":"

DEPRECATED in V1.3 - see GET /germplasm

\n","urlObject":{"path":["germplasm-search"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Permanent unique identifier (DOI, URI, etc.)

\n","type":"text/plain"},"key":"germplasmPUI","value":""},{"description":{"content":"

Internal database identifier

\n","type":"text/plain"},"key":"germplasmDbId","value":""},{"description":{"content":"

Name of the germplasm

\n","type":"text/plain"},"key":"germplasmName","value":""},{"description":{"content":"

The common crop name related to this germplasm

\n","type":"text/plain"},"key":"commonCropName","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"5ade326e-3f5e-4af4-a8a5-8732a4d0ec5a","name":"OK","originalRequest":{"method":"GET","header":[],"url":{"raw":"https://test-server.brapi.org/brapi/v1/germplasm-search?germplasmPUI=&germplasmDbId=&germplasmName=&commonCropName=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["germplasm-search"],"query":[{"key":"germplasmPUI","value":""},{"key":"germplasmDbId","value":""},{"key":"germplasmName","value":""},{"key":"commonCropName","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 2,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"accessionNumber\": \"A000003\",\n \"acquisitionDate\": \"2001-01-01T00:00:00.000Z\",\n \"biologicalStatusOfAccessionCode\": 500,\n \"breedingMethodDbId\": \"bm1\",\n \"commonCropName\": \"G000003\",\n \"countryOfOriginCode\": \"COUNTRY1\",\n \"defaultDisplayName\": \"G000003\",\n \"documentationURL\": \"https://brapi.org\",\n \"donors\": [],\n \"genus\": \"Fructus\",\n \"germplasmDbId\": \"3\",\n \"germplasmGenus\": \"Fructus\",\n \"germplasmName\": \"Name003\",\n \"germplasmPUI\": \"http://pui.per/accession/A000003\",\n \"germplasmSpecies\": \"novus\",\n \"instituteCode\": \"PER001\",\n \"instituteName\": \"INST1\",\n \"pedigree\": \"A000001/A000002\",\n \"seedSource\": \"A000001/A000002\",\n \"species\": \"novus\",\n \"speciesAuthority\": \"L\",\n \"subtaxa\": \"subtaxa\",\n \"subtaxaAuthority\": \"N\",\n \"synonyms\": [\n \"variety 1\"\n ],\n \"taxonIds\": [\n {\n \"sourceName\": \"ncbiTaxon\",\n \"taxonId\": \"2340\"\n },\n {\n \"sourceName\": \"ciradTaxon\",\n \"taxonId\": \"E312\"\n }\n ],\n \"typeOfGermplasmStorageCode\": []\n },\n {\n \"accessionNumber\": \"A000004\",\n \"acquisitionDate\": \"2001-01-01T00:00:00.000Z\",\n \"biologicalStatusOfAccessionCode\": 500,\n \"breedingMethodDbId\": \"bm1\",\n \"commonCropName\": \"G000004\",\n \"countryOfOriginCode\": \"COUNTRY1\",\n \"defaultDisplayName\": \"G000004\",\n \"documentationURL\": \"https://brapi.org\",\n \"donors\": [],\n \"genus\": \"Fructus\",\n \"germplasmDbId\": \"4\",\n \"germplasmGenus\": \"Fructus\",\n \"germplasmName\": \"Name004\",\n \"germplasmPUI\": \"http://pui.per/accession/A000004\",\n \"germplasmSpecies\": \"novus\",\n \"instituteCode\": \"PER001\",\n \"instituteName\": \"INST1\",\n \"pedigree\": \"A000001/A000003\",\n \"seedSource\": \"open pollination\",\n \"species\": \"novus\",\n \"speciesAuthority\": \"L\",\n \"subtaxa\": \"subtaxa\",\n \"subtaxaAuthority\": \"N\",\n \"synonyms\": [\n \"variety 4\"\n ],\n \"taxonIds\": [\n {\n \"sourceName\": \"ncbiTaxon\",\n \"taxonId\": \"2340\"\n },\n {\n \"sourceName\": \"ciradTaxon\",\n \"taxonId\": \"E312\"\n }\n ],\n \"typeOfGermplasmStorageCode\": []\n }\n ]\n }\n}"}],"_postman_id":"914322e1-daab-4637-ad6c-4fc16e9f6e9a"},{"name":"Germplasm search through POST","id":"9d401452-b600-472e-aabe-eba9f2e2c9ed","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"POST","header":[{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"accessionNumbers\": [\n \"\",\n \"\"\n ],\n \"commonCropNames\": [\n \"\",\n \"\"\n ],\n \"germplasmDbIds\": [\n \"\",\n \"\"\n ],\n \"germplasmGenus\": [\n \"\",\n \"\"\n ],\n \"germplasmNames\": [\n \"\",\n \"\"\n ],\n \"germplasmPUIs\": [\n \"\",\n \"\"\n ],\n \"germplasmSpecies\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/germplasm-search","description":"

DEPRECATED in V1.3 - see POST /search/germplasm

\n","urlObject":{"path":["germplasm-search"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[]}},"response":[{"id":"8c190699-70ef-4bdc-98d6-0b89c9b8d46a","name":"OK","originalRequest":{"method":"POST","header":[{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"accessionNumbers\": [\n \"\",\n \"\"\n ],\n \"commonCropNames\": [\n \"\",\n \"\"\n ],\n \"germplasmDbIds\": [\n \"\",\n \"\"\n ],\n \"germplasmGenus\": [\n \"\",\n \"\"\n ],\n \"germplasmNames\": [\n \"\",\n \"\"\n ],\n \"germplasmPUIs\": [\n \"\",\n \"\"\n ],\n \"germplasmSpecies\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/germplasm-search"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 2,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"accessionNumber\": \"A000003\",\n \"acquisitionDate\": \"2001-01-01T00:00:00.000Z\",\n \"biologicalStatusOfAccessionCode\": 500,\n \"breedingMethodDbId\": \"bm1\",\n \"commonCropName\": \"G000003\",\n \"countryOfOriginCode\": \"COUNTRY1\",\n \"defaultDisplayName\": \"G000003\",\n \"documentationURL\": \"https://brapi.org\",\n \"donors\": [],\n \"genus\": \"Fructus\",\n \"germplasmDbId\": \"3\",\n \"germplasmGenus\": \"Fructus\",\n \"germplasmName\": \"Name003\",\n \"germplasmPUI\": \"http://pui.per/accession/A000003\",\n \"germplasmSpecies\": \"novus\",\n \"instituteCode\": \"PER001\",\n \"instituteName\": \"INST1\",\n \"pedigree\": \"A000001/A000002\",\n \"seedSource\": \"A000001/A000002\",\n \"species\": \"novus\",\n \"speciesAuthority\": \"L\",\n \"subtaxa\": \"subtaxa\",\n \"subtaxaAuthority\": \"N\",\n \"synonyms\": [\n \"variety 1\"\n ],\n \"taxonIds\": [\n {\n \"sourceName\": \"ncbiTaxon\",\n \"taxonId\": \"2340\"\n },\n {\n \"sourceName\": \"ciradTaxon\",\n \"taxonId\": \"E312\"\n }\n ],\n \"typeOfGermplasmStorageCode\": []\n },\n {\n \"accessionNumber\": \"A000004\",\n \"acquisitionDate\": \"2001-01-01T00:00:00.000Z\",\n \"biologicalStatusOfAccessionCode\": 500,\n \"breedingMethodDbId\": \"bm1\",\n \"commonCropName\": \"G000004\",\n \"countryOfOriginCode\": \"COUNTRY1\",\n \"defaultDisplayName\": \"G000004\",\n \"documentationURL\": \"https://brapi.org\",\n \"donors\": [],\n \"genus\": \"Fructus\",\n \"germplasmDbId\": \"4\",\n \"germplasmGenus\": \"Fructus\",\n \"germplasmName\": \"Name004\",\n \"germplasmPUI\": \"http://pui.per/accession/A000004\",\n \"germplasmSpecies\": \"novus\",\n \"instituteCode\": \"PER001\",\n \"instituteName\": \"INST1\",\n \"pedigree\": \"A000001/A000003\",\n \"seedSource\": \"open pollination\",\n \"species\": \"novus\",\n \"speciesAuthority\": \"L\",\n \"subtaxa\": \"subtaxa\",\n \"subtaxaAuthority\": \"N\",\n \"synonyms\": [\n \"variety 4\"\n ],\n \"taxonIds\": [\n {\n \"sourceName\": \"ncbiTaxon\",\n \"taxonId\": \"2340\"\n },\n {\n \"sourceName\": \"ciradTaxon\",\n \"taxonId\": \"E312\"\n }\n ],\n \"typeOfGermplasmStorageCode\": []\n }\n ]\n }\n}"}],"_postman_id":"9d401452-b600-472e-aabe-eba9f2e2c9ed"}],"id":"6ee36e93-97a1-45c2-9346-5569d8f4037f","_postman_id":"6ee36e93-97a1-45c2-9346-5569d8f4037f","description":""},{"name":"images","item":[{"name":"{image Db Id}","item":[{"name":"Get the an image meta data summary","id":"0c2d4425-7f88-4d49-97bb-c899204ea962","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/images/:imageDbId","description":"

Get one image meta data object

\n

Implementation Notes

\n
    \n

  • 'imageURL' should be a complete URL decribing the location of the image. There is no BrAPI call for retireiving the image content, so it could be on a different path, or a different host.

    \n
    • \n

  • 'descriptiveOntologyTerm' can be thought of as Tags for the image. These could be simple descriptive words, or ontology references, or full ontology URI's.

    \n
    • \n
\n","urlObject":{"path":["images",":imageDbId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

The unique identifier for a image

\n","type":"text/plain"},"type":"any","value":"","key":"imageDbId"}]}},"response":[{"id":"076f8991-c0bd-4cf2-92cb-05d05db8c788","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/images/"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"2380ecad-01a0-421c-9f9c-9919bc763d4b","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/images/"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"2e12c79e-3501-4b37-b8fd-c812d34ad607","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/images/"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"56e2a24d-4578-43f3-bc9b-696867fb6f85","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/images/"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"additionalInfo\": {},\n \"copyright\": \"Copyright 2018\",\n \"description\": \"BrAPI Logo\",\n \"descriptiveOntologyTerms\": [\n \"brapi\",\n \"logo\"\n ],\n \"imageDbId\": \"img1\",\n \"imageFileName\": \"brapi-logo.svg\",\n \"imageFileSize\": 3676,\n \"imageHeight\": 56,\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n -110.11301,\n 50.010082\n ],\n \"type\": \"Point\"\n },\n \"type\": \"Feature\"\n },\n \"imageName\": \"brapiLogo\",\n \"imageTimeStamp\": \"2011-06-14T00:00:00.000Z\",\n \"imageURL\": \"https://brapi.org/assets/images/brapi-logo.svg\",\n \"imageWidth\": 258,\n \"mimeType\": \"image/svg\",\n \"observationDbIds\": [\n \"1\",\n \"2\"\n ],\n \"observationUnitDbId\": \"1\"\n }\n}"},{"id":"86200bb5-0fad-4cf1-af3a-449c5799ef0f","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/images/"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""}],"_postman_id":"0c2d4425-7f88-4d49-97bb-c899204ea962"},{"name":"Update an image meta data","id":"c7f49841-285f-4c9d-95d1-888f607ab61d","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"PUT","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"additionalInfo\": \"\",\n \"copyright\": \"\",\n \"description\": \"\",\n \"descriptiveOntologyTerms\": [\n \"\",\n \"\"\n ],\n \"imageFileName\": \"\",\n \"imageFileSize\": \"\",\n \"imageHeight\": \"\",\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n \"\",\n \"\"\n ],\n \"type\": \"\"\n },\n \"type\": \"\"\n },\n \"imageName\": \"\",\n \"imageTimeStamp\": \"\",\n \"imageWidth\": \"\",\n \"mimeType\": \"\",\n \"observationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationUnitDbId\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/images/:imageDbId","description":"

Update an image meta data object

\n

Implementation Notes

\n
    \n

  • This call should be paired with 'PUT /images/{imageDbId}/imagecontent' for full capability

    \n
    • \n

  • A server may choose to modify the image meta data object based on the actually image which has been uploaded.

    \n
    • \n

  • Image data may be stored in a database or file system. Servers should generate and provide the \"imageURL\" as an absolute path for retrieving the image, wherever it happens to live.

    \n
    • \n

  • 'descriptiveOntologyTerm' can be thought of as Tags for the image. These could be simple descriptive words, or ontology references, or full ontology URI's.

    \n
    • \n

  • The /images calls support a GeoJSON object structure for describing their location. The BrAPI spec for GeoJSON only supports two of the possible geometries: Points and Polygons.

    \n
    • \n

  • With most images, the Point geometry should be used, and it should indicate the longitude and latitude of the camera.

    \n
    • \n

  • For top down images (ie from drones, cranes, etc), the Point geometry may be used to indicate the longitude and latitude of the centroid of the image content, and the Polygon geometry may be used to indicate the border of the image content. '

    \n
    • \n
\n","urlObject":{"path":["images",":imageDbId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

The unique identifier for a image

\n","type":"text/plain"},"type":"any","value":"","key":"imageDbId"}]}},"response":[{"id":"0864b5d2-2702-408c-a027-3dfb2a9e6b00","name":"Forbidden","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"additionalInfo\": \"\",\n \"copyright\": \"\",\n \"description\": \"\",\n \"descriptiveOntologyTerms\": [\n \"\",\n \"\"\n ],\n \"imageFileName\": \"\",\n \"imageFileSize\": \"\",\n \"imageHeight\": \"\",\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n \"\",\n \"\"\n ],\n \"type\": \"\"\n },\n \"type\": \"\"\n },\n \"imageName\": \"\",\n \"imageTimeStamp\": \"\",\n \"imageWidth\": \"\",\n \"mimeType\": \"\",\n \"observationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationUnitDbId\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/images/"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"2468a35b-b988-4099-becd-11ec73b978a3","name":"Not Found","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"additionalInfo\": \"\",\n \"copyright\": \"\",\n \"description\": \"\",\n \"descriptiveOntologyTerms\": [\n \"\",\n \"\"\n ],\n \"imageFileName\": \"\",\n \"imageFileSize\": \"\",\n \"imageHeight\": \"\",\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n \"\",\n \"\"\n ],\n \"type\": \"\"\n },\n \"type\": \"\"\n },\n \"imageName\": \"\",\n \"imageTimeStamp\": \"\",\n \"imageWidth\": \"\",\n \"mimeType\": \"\",\n \"observationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationUnitDbId\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/images/"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"5a258ba9-9f53-44a6-bf59-2ba80114e7b4","name":"Bad Request","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"additionalInfo\": \"\",\n \"copyright\": \"\",\n \"description\": \"\",\n \"descriptiveOntologyTerms\": [\n \"\",\n \"\"\n ],\n \"imageFileName\": \"\",\n \"imageFileSize\": \"\",\n \"imageHeight\": \"\",\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n \"\",\n \"\"\n ],\n \"type\": \"\"\n },\n \"type\": \"\"\n },\n \"imageName\": \"\",\n \"imageTimeStamp\": \"\",\n \"imageWidth\": \"\",\n \"mimeType\": \"\",\n \"observationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationUnitDbId\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/images/"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"6ccd6aeb-b20a-4017-afc7-a891855fc8b4","name":"Unauthorized","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"additionalInfo\": \"\",\n \"copyright\": \"\",\n \"description\": \"\",\n \"descriptiveOntologyTerms\": [\n \"\",\n \"\"\n ],\n \"imageFileName\": \"\",\n \"imageFileSize\": \"\",\n \"imageHeight\": \"\",\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n \"\",\n \"\"\n ],\n \"type\": \"\"\n },\n \"type\": \"\"\n },\n \"imageName\": \"\",\n \"imageTimeStamp\": \"\",\n \"imageWidth\": \"\",\n \"mimeType\": \"\",\n \"observationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationUnitDbId\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/images/"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"c9f74ae9-d748-41cc-bca7-a53eb9991d06","name":"OK","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"additionalInfo\": \"\",\n \"copyright\": \"\",\n \"description\": \"\",\n \"descriptiveOntologyTerms\": [\n \"\",\n \"\"\n ],\n \"imageFileName\": \"\",\n \"imageFileSize\": \"\",\n \"imageHeight\": \"\",\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n \"\",\n \"\"\n ],\n \"type\": \"\"\n },\n \"type\": \"\"\n },\n \"imageName\": \"\",\n \"imageTimeStamp\": \"\",\n \"imageWidth\": \"\",\n \"mimeType\": \"\",\n \"observationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationUnitDbId\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/images/"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"additionalInfo\": {},\n \"copyright\": \"Copyright 2019\",\n \"description\": \"BrAPI Logo\",\n \"descriptiveOntologyTerms\": [\n \"brapi\",\n \"logo\"\n ],\n \"imageDbId\": \"img1\",\n \"imageFileName\": \"brapi-logo.svg\",\n \"imageFileSize\": 3676,\n \"imageHeight\": 56,\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n -110.11301,\n 50.010082\n ],\n \"type\": \"Point\"\n },\n \"type\": \"Feature\"\n },\n \"imageName\": \"brapiLogo\",\n \"imageTimeStamp\": \"1969-12-31T00:00:00.000Z\",\n \"imageURL\": \"\",\n \"imageWidth\": 258,\n \"mimeType\": \"image/svg\",\n \"observationDbIds\": [\n \"1\",\n \"2\"\n ],\n \"observationUnitDbId\": \"11\"\n }\n}"}],"_postman_id":"c7f49841-285f-4c9d-95d1-888f607ab61d"},{"name":"Update an image with the image file content","id":"92bf7345-68bc-443b-9baa-64984510e809","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"PUT","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"image/*"}],"body":{"mode":"raw","raw":"\"\""},"url":"https://test-server.brapi.org/brapi/v1/images/:imageDbId/imagecontent","description":"

Update an image with the image file content

\n

Implementation Notes

\n
    \n

  • This call should be paired with 'PUT /images/{imageDbId}' for full capability

    \n
    • \n

  • A server may choose to modify the image meta data object based on the actually image which has been uploaded.

    \n
    • \n

  • Image data may be stored in a database or file system. Servers should generate and provide the \"imageURL\" for retrieving the image, wherever it happens to live.

    \n
    • \n
\n","urlObject":{"path":["images",":imageDbId","imagecontent"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

The unique identifier for a image

\n","type":"text/plain"},"type":"any","value":"","key":"imageDbId"}]}},"response":[{"id":"1c1bd36d-e79c-4467-8aae-b5a3a37b1aa7","name":"Bad Request","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"image/*"}],"body":{"mode":"raw","raw":"\"\""},"url":"https://test-server.brapi.org/brapi/v1/images//imagecontent"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"632b9dda-96e2-46b9-8401-4fb2f20437f7","name":"Forbidden","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"image/*"}],"body":{"mode":"raw","raw":"\"\""},"url":"https://test-server.brapi.org/brapi/v1/images//imagecontent"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"9c8ce684-d70a-41a1-a34d-f9d51a6480a3","name":"Unauthorized","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"image/*"}],"body":{"mode":"raw","raw":"\"\""},"url":"https://test-server.brapi.org/brapi/v1/images//imagecontent"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"a372583d-9769-4272-aff4-5fe9459124c4","name":"Not Found","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"image/*"}],"body":{"mode":"raw","raw":"\"\""},"url":"https://test-server.brapi.org/brapi/v1/images//imagecontent"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"d010be4e-ea0b-4132-b64d-7d533c91ba22","name":"OK","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"image/*"}],"body":{"mode":"raw","raw":"\"\""},"url":"https://test-server.brapi.org/brapi/v1/images//imagecontent"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"additionalInfo\": {},\n \"copyright\": \"Copyright 2019\",\n \"description\": \"BrAPI Logo\",\n \"descriptiveOntologyTerms\": [\n \"brapi\",\n \"logo\"\n ],\n \"imageDbId\": \"img1\",\n \"imageFileName\": \"brapi-logo.svg\",\n \"imageFileSize\": 3676,\n \"imageHeight\": 56,\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n -110.11301,\n 50.010082\n ],\n \"type\": \"Point\"\n },\n \"type\": \"Feature\"\n },\n \"imageName\": \"brapiLogo\",\n \"imageTimeStamp\": \"1969-12-31T00:00:00.000Z\",\n \"imageURL\": \"http://localhost:8080/brapi/v1/images/img1/brapi-logo.svg\",\n \"imageWidth\": 258,\n \"mimeType\": \"image/svg\",\n \"observationDbIds\": [\n \"1\",\n \"2\"\n ],\n \"observationUnitDbId\": \"11\"\n }\n}"}],"_postman_id":"92bf7345-68bc-443b-9baa-64984510e809"}],"id":"649984a5-1aee-473e-b29b-6ce1b2c2e667","_postman_id":"649984a5-1aee-473e-b29b-6ce1b2c2e667","description":""},{"name":"Get the image meta data summaries","id":"9530c5a9-575b-472c-9615-7081ce70b949","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/images?imageDbId=&imageName=&observationUnitDbId=&observationDbId=&descriptiveOntologyTerm=&page=&pageSize=","description":"

Get filtered set of image meta data

\n

Implementation Notes

\n
    \n

  • 'imageURL' should be a complete URL decribing the location of the image. There is no BrAPI call for retireiving the image content, so it could be on a different path, or a different host.

    \n
    • \n

  • 'descriptiveOntologyTerm' can be thought of as Tags for the image. These could be simple descriptive words, or ontology references, or full ontology URI's.

    \n
    • \n
\n","urlObject":{"path":["images"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

The unique identifier for a image

\n","type":"text/plain"},"key":"imageDbId","value":""},{"description":{"content":"

The human readable name of an image

\n","type":"text/plain"},"key":"imageName","value":""},{"description":{"content":"

The unique identifier of the observation unit an image is portraying

\n","type":"text/plain"},"key":"observationUnitDbId","value":""},{"description":{"content":"

The unique identifier of the observation an image is accosiated with

\n","type":"text/plain"},"key":"observationDbId","value":""},{"description":{"content":"

A descriptive term associated with an image

\n","type":"text/plain"},"key":"descriptiveOntologyTerm","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"194213b2-0697-4d6d-984b-cae94ada6bd5","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/images?imageDbId=&imageName=&observationUnitDbId=&observationDbId=&descriptiveOntologyTerm=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["images"],"query":[{"key":"imageDbId","value":""},{"key":"imageName","value":""},{"key":"observationUnitDbId","value":""},{"key":"observationDbId","value":""},{"key":"descriptiveOntologyTerm","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"6afd2d7f-833a-4638-9f90-d879c837ed6b","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/images?imageDbId=&imageName=&observationUnitDbId=&observationDbId=&descriptiveOntologyTerm=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["images"],"query":[{"key":"imageDbId","value":""},{"key":"imageName","value":""},{"key":"observationUnitDbId","value":""},{"key":"observationDbId","value":""},{"key":"descriptiveOntologyTerm","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 2,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"additionalInfo\": {},\n \"copyright\": \"Copyright 2018\",\n \"description\": \"BrAPI Logo\",\n \"descriptiveOntologyTerms\": [\n \"brapi\",\n \"logo\"\n ],\n \"imageDbId\": \"img1\",\n \"imageFileName\": \"brapi-logo.svg\",\n \"imageFileSize\": 3676,\n \"imageHeight\": 56,\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n -110.11301,\n 50.010082\n ],\n \"type\": \"Point\"\n },\n \"type\": \"Feature\"\n },\n \"imageName\": \"brapiLogo\",\n \"imageTimeStamp\": \"2011-06-14T00:00:00.000Z\",\n \"imageURL\": \"https://brapi.org/assets/images/brapi-logo.svg\",\n \"imageWidth\": 258,\n \"mimeType\": \"image/svg\",\n \"observationDbIds\": [\n \"1\",\n \"2\"\n ],\n \"observationUnitDbId\": \"1\"\n },\n {\n \"additionalInfo\": {},\n \"copyright\": \"Copyright 2018\",\n \"description\": \"BrAPI Logo\",\n \"descriptiveOntologyTerms\": [\n \"brapi\",\n \"logo\"\n ],\n \"imageDbId\": \"img2\",\n \"imageFileName\": \"brapi-logo.svg\",\n \"imageFileSize\": 3676,\n \"imageHeight\": 56,\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n -110.11301,\n 50.010082\n ],\n \"type\": \"Point\"\n },\n \"type\": \"Feature\"\n },\n \"imageName\": \"brapiLogo\",\n \"imageTimeStamp\": \"2011-06-14T00:00:00.000Z\",\n \"imageURL\": \"https://brapi.org/assets/images/brapi-logo.svg\",\n \"imageWidth\": 258,\n \"mimeType\": \"image/svg\",\n \"observationDbIds\": [\n \"1\",\n \"2\"\n ],\n \"observationUnitDbId\": \"1\"\n }\n ]\n }\n}"},{"id":"cc848ca7-8b7a-4308-9a56-3df0bf856719","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/images?imageDbId=&imageName=&observationUnitDbId=&observationDbId=&descriptiveOntologyTerm=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["images"],"query":[{"key":"imageDbId","value":""},{"key":"imageName","value":""},{"key":"observationUnitDbId","value":""},{"key":"observationDbId","value":""},{"key":"descriptiveOntologyTerm","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"fcf83fb9-a8bc-4d14-a819-74fb9c0a4c1d","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/images?imageDbId=&imageName=&observationUnitDbId=&observationDbId=&descriptiveOntologyTerm=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["images"],"query":[{"key":"imageDbId","value":""},{"key":"imageName","value":""},{"key":"observationUnitDbId","value":""},{"key":"observationDbId","value":""},{"key":"descriptiveOntologyTerm","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""}],"_postman_id":"9530c5a9-575b-472c-9615-7081ce70b949"},{"name":"Create a new image meta data object","id":"b1f8a47e-c26f-4429-a8e8-50c0b473d89c","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"POST","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"additionalInfo\": \"\",\n \"copyright\": \"\",\n \"description\": \"\",\n \"descriptiveOntologyTerms\": [\n \"\",\n \"\"\n ],\n \"imageFileName\": \"\",\n \"imageFileSize\": \"\",\n \"imageHeight\": \"\",\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n \"\",\n \"\"\n ],\n \"type\": \"\"\n },\n \"type\": \"\"\n },\n \"imageName\": \"\",\n \"imageTimeStamp\": \"\",\n \"imageWidth\": \"\",\n \"mimeType\": \"\",\n \"observationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationUnitDbId\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/images","description":"

Create a new image meta data object

\n

Implementation Notes

\n
    \n

  • 'imageURL' should be a complete URL decribing the location of the image. There is no BrAPI call for retireiving the image content, so it could be on a different path, or a different host.

    \n
    • \n

  • 'descriptiveOntologyTerm' can be thought of as Tags for the image. These could be simple descriptive words, or ontology references, or full ontology URI's.

    \n
    • \n

  • The /images calls support a GeoJSON object structure for describing their location. The BrAPI spec for GeoJSON only supports two of the possible geometries: Points and Polygons.

    \n
    • \n

  • With most images, the Point geometry should be used, and it should indicate the longitude and latitude of the camera.

    \n
    • \n

  • For top down images (ie from drones, cranes, etc), the Point geometry may be used to indicate the longitude and latitude of the centroid of the image content, and the Polygon geometry may be used to indicate the border of the image content.

    \n
    • \n
\n","urlObject":{"path":["images"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[]}},"response":[{"id":"23e5a30e-230a-4349-93d8-488fd8dc80b6","name":"Forbidden","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"additionalInfo\": \"\",\n \"copyright\": \"\",\n \"description\": \"\",\n \"descriptiveOntologyTerms\": [\n \"\",\n \"\"\n ],\n \"imageFileName\": \"\",\n \"imageFileSize\": \"\",\n \"imageHeight\": \"\",\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n \"\",\n \"\"\n ],\n \"type\": \"\"\n },\n \"type\": \"\"\n },\n \"imageName\": \"\",\n \"imageTimeStamp\": \"\",\n \"imageWidth\": \"\",\n \"mimeType\": \"\",\n \"observationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationUnitDbId\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/images"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"78b6e717-70d3-47ef-a95c-bfe33a9c63a9","name":"Unauthorized","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"additionalInfo\": \"\",\n \"copyright\": \"\",\n \"description\": \"\",\n \"descriptiveOntologyTerms\": [\n \"\",\n \"\"\n ],\n \"imageFileName\": \"\",\n \"imageFileSize\": \"\",\n \"imageHeight\": \"\",\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n \"\",\n \"\"\n ],\n \"type\": \"\"\n },\n \"type\": \"\"\n },\n \"imageName\": \"\",\n \"imageTimeStamp\": \"\",\n \"imageWidth\": \"\",\n \"mimeType\": \"\",\n \"observationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationUnitDbId\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/images"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"8f7726b8-3c59-4971-9ffe-88572322419e","name":"Bad Request","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"additionalInfo\": \"\",\n \"copyright\": \"\",\n \"description\": \"\",\n \"descriptiveOntologyTerms\": [\n \"\",\n \"\"\n ],\n \"imageFileName\": \"\",\n \"imageFileSize\": \"\",\n \"imageHeight\": \"\",\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n \"\",\n \"\"\n ],\n \"type\": \"\"\n },\n \"type\": \"\"\n },\n \"imageName\": \"\",\n \"imageTimeStamp\": \"\",\n \"imageWidth\": \"\",\n \"mimeType\": \"\",\n \"observationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationUnitDbId\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/images"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"e83adffa-749d-4a6a-b6e9-3b817f17ff74","name":"OK","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"additionalInfo\": \"\",\n \"copyright\": \"\",\n \"description\": \"\",\n \"descriptiveOntologyTerms\": [\n \"\",\n \"\"\n ],\n \"imageFileName\": \"\",\n \"imageFileSize\": \"\",\n \"imageHeight\": \"\",\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n \"\",\n \"\"\n ],\n \"type\": \"\"\n },\n \"type\": \"\"\n },\n \"imageName\": \"\",\n \"imageTimeStamp\": \"\",\n \"imageWidth\": \"\",\n \"mimeType\": \"\",\n \"observationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationUnitDbId\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/images"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"additionalInfo\": {},\n \"copyright\": \"Copyright 2019\",\n \"description\": \"BrAPI Logo\",\n \"descriptiveOntologyTerms\": [\n \"brapi\",\n \"logo\"\n ],\n \"imageDbId\": \"ce15937e-093e-4624-8950-00dab3172e4c\",\n \"imageFileName\": \"brapi-logo.svg\",\n \"imageFileSize\": 3676,\n \"imageHeight\": 56,\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n -110.11301,\n 50.010082\n ],\n \"type\": \"Point\"\n },\n \"type\": \"Feature\"\n },\n \"imageName\": \"brapiLogo\",\n \"imageTimeStamp\": \"1969-12-31T00:00:00.000Z\",\n \"imageURL\": \"\",\n \"imageWidth\": 258,\n \"mimeType\": \"image/svg\",\n \"observationDbIds\": [\n \"1\",\n \"2\"\n ],\n \"observationUnitDbId\": \"11\"\n }\n}"}],"_postman_id":"b1f8a47e-c26f-4429-a8e8-50c0b473d89c"}],"id":"d4efc556-f5df-41f0-b9c9-3e0929f11529","_postman_id":"d4efc556-f5df-41f0-b9c9-3e0929f11529","description":""},{"name":"lists","item":[{"name":"{list Db Id}","item":[{"name":"Get the details of a specific List","id":"5903cc3d-0658-44dc-8099-e941cf7a8d18","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/lists/:listDbId","description":"

Get a specific generic lists

\n","urlObject":{"path":["lists",":listDbId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

The unique ID of this generic list

\n","type":"text/plain"},"type":"any","value":"","key":"listDbId"}]}},"response":[{"id":"37622d49-2916-4fc4-b368-3a85c8a0417f","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/lists/"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n \"1\",\n \"2\",\n \"3\"\n ],\n \"dateCreated\": \"2011-06-15T02:12:51.000Z\",\n \"dateModified\": \"2011-06-15T02:12:51.000Z\",\n \"description\": \"Example List of germplasm\",\n \"listDbId\": \"list1\",\n \"listName\": \"Example List 1\",\n \"listOwnerName\": \"Bob Robertson\",\n \"listOwnerPersonDbId\": \"person1\",\n \"listSize\": 3,\n \"listSource\": \"User Created\",\n \"listType\": \"germplasm\"\n }\n}"},{"id":"59a1119a-0317-4987-89b8-a3353df4d5f1","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/lists/"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"71087048-0b32-42c6-b9ae-b3d21b2d8484","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/lists/"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"b02b6272-57da-43a3-a95b-e90f62ea7d05","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/lists/"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"ef4a0f78-8bc1-44ee-a689-67745b5e2c47","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/lists/"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""}],"_postman_id":"5903cc3d-0658-44dc-8099-e941cf7a8d18"},{"name":"Update a specific List","id":"628657ab-fe65-4a50-b806-3c8e976c3fe6","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"PUT","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"listType\": \"\",\n \"data\": [\n \"\",\n \"\"\n ],\n \"description\": \"\",\n \"listName\": \"\",\n \"listOwnerName\": \"\",\n \"listOwnerPersonDbId\": \"\",\n \"listSize\": \"\",\n \"listSource\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/lists/:listDbId","description":"

Update an existing generic list

\n","urlObject":{"path":["lists",":listDbId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

The unique ID of this generic list

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Required parameter is missing\""},{"id":"97fe2533-982c-43ae-bcf2-27a057dfa2e4","name":"Forbidden","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"listType\": \"\",\n \"data\": [\n \"\",\n \"\"\n ],\n \"description\": \"\",\n \"listName\": \"\",\n \"listOwnerName\": \"\",\n \"listOwnerPersonDbId\": \"\",\n \"listSize\": \"\",\n \"listSource\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/lists/"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"a954bc05-1161-4c0f-b0ad-baa486bc5f5e","name":"OK","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"listType\": \"\",\n \"data\": [\n \"\",\n \"\"\n ],\n \"description\": \"\",\n \"listName\": \"\",\n \"listOwnerName\": \"\",\n \"listOwnerPersonDbId\": \"\",\n \"listSize\": \"\",\n \"listSource\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/lists/"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n \"string\"\n ],\n \"dateCreated\": \"2011-06-15T02:12:51.000Z\",\n \"dateModified\": \"2018-12-05T19:36:04.000Z\",\n \"description\": \"string\",\n \"listDbId\": \"list1\",\n \"listName\": \"string\",\n \"listOwnerName\": \"string\",\n \"listOwnerPersonDbId\": \"string\",\n \"listSize\": 1,\n \"listSource\": \"string\",\n \"listType\": \"germplasm\"\n }\n}"},{"id":"db25a6a9-f842-4556-9531-98a356e87fe7","name":"Not Found","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"listType\": \"\",\n \"data\": [\n \"\",\n \"\"\n ],\n \"description\": \"\",\n \"listName\": \"\",\n \"listOwnerName\": \"\",\n \"listOwnerPersonDbId\": \"\",\n \"listSize\": \"\",\n \"listSource\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/lists/"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"dce5b70c-b909-4104-b72d-be3a038df09f","name":"Unauthorized","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"listType\": \"\",\n \"data\": [\n \"\",\n \"\"\n ],\n \"description\": \"\",\n \"listName\": \"\",\n \"listOwnerName\": \"\",\n \"listOwnerPersonDbId\": \"\",\n \"listSize\": \"\",\n \"listSource\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/lists/"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""}],"_postman_id":"628657ab-fe65-4a50-b806-3c8e976c3fe6"},{"name":"Add Items to a specific List","id":"6fe87225-d2a4-4b6f-81bf-ed839e3c154f","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"POST","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"[\n \"\",\n \"\"\n]"},"url":"https://test-server.brapi.org/brapi/v1/lists/:listDbId/items","description":"

Add new data to a specific generic lists

\n","urlObject":{"path":["lists",":listDbId","items"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

The unique ID of this generic list

\n","type":"text/plain"},"type":"any","value":"","key":"listDbId"}]}},"response":[{"id":"12a413a7-2ebb-48ab-859f-b7be92aa4d17","name":"Forbidden","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"[\n \"\",\n \"\"\n]"},"url":"https://test-server.brapi.org/brapi/v1/lists//items"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"7d298081-70ef-4cdb-b7fc-93e529c601af","name":"Bad Request","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"[\n \"\",\n \"\"\n]"},"url":"https://test-server.brapi.org/brapi/v1/lists//items"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"8266e8de-2b13-4a35-8704-1c721af8d776","name":"Unauthorized","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"[\n \"\",\n \"\"\n]"},"url":"https://test-server.brapi.org/brapi/v1/lists//items"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"a0e85e50-24c9-4b18-b246-23d196e83ced","name":"Not Found","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"[\n \"\",\n \"\"\n]"},"url":"https://test-server.brapi.org/brapi/v1/lists//items"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"b8349a2a-a848-463e-a3c5-4eb199e22381","name":"OK","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"[\n \"\",\n \"\"\n]"},"url":"https://test-server.brapi.org/brapi/v1/lists//items"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n \"1\",\n \"2\",\n \"3\"\n ],\n \"dateCreated\": \"2011-06-15T02:12:51.000Z\",\n \"dateModified\": \"2018-12-05T19:36:04.000Z\",\n \"description\": \"string\",\n \"listDbId\": \"list1\",\n \"listName\": \"string\",\n \"listOwnerName\": \"string\",\n \"listOwnerPersonDbId\": \"string\",\n \"listSize\": 3,\n \"listSource\": \"string\",\n \"listType\": \"germplasm\"\n }\n}"}],"_postman_id":"6fe87225-d2a4-4b6f-81bf-ed839e3c154f"}],"id":"3a20ef34-01cb-43d1-bd53-7dc9a72d81e8","_postman_id":"3a20ef34-01cb-43d1-bd53-7dc9a72d81e8","description":""},{"name":"Get the List Summaries","id":"a545d643-8014-486e-8567-1046bdbdd61a","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/lists?listType=&listName=&listDbId=&listSource=&page=&pageSize=","description":"

Get filtered set of generic lists

\n","urlObject":{"path":["lists"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

The type of objects contained by this generic list

\n","type":"text/plain"},"key":"listType","value":""},{"description":{"content":"

The human readable name of this generic list

\n","type":"text/plain"},"key":"listName","value":""},{"description":{"content":"

The unique ID of this generic list

\n","type":"text/plain"},"key":"listDbId","value":""},{"description":{"content":"

The source tag of this generic list

\n","type":"text/plain"},"key":"listSource","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"43f19629-009d-48f7-a6ea-ce7ceebc63a6","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/lists?listType=&listName=&listDbId=&listSource=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["lists"],"query":[{"key":"listType","value":""},{"key":"listName","value":""},{"key":"listDbId","value":""},{"key":"listSource","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"73daa185-4232-493c-8759-26002b1a1d09","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/lists?listType=&listName=&listDbId=&listSource=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["lists"],"query":[{"key":"listType","value":""},{"key":"listName","value":""},{"key":"listDbId","value":""},{"key":"listSource","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"a7345e88-3dac-4bc4-84ae-745a7ec5af54","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/lists?listType=&listName=&listDbId=&listSource=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["lists"],"query":[{"key":"listType","value":""},{"key":"listName","value":""},{"key":"listDbId","value":""},{"key":"listSource","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 2,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"dateCreated\": \"2011-06-15T02:12:51.000Z\",\n \"dateModified\": \"2011-06-15T02:12:51.000Z\",\n \"description\": \"Example List of germplasm\",\n \"listDbId\": \"list1\",\n \"listName\": \"Example List 1\",\n \"listOwnerName\": \"Bob Robertson\",\n \"listOwnerPersonDbId\": \"person1\",\n \"listSize\": 3,\n \"listSource\": \"User Created\",\n \"listType\": \"germplasm\"\n },\n {\n \"dateCreated\": \"2011-06-15T02:12:51.000Z\",\n \"dateModified\": \"2011-06-15T02:12:51.000Z\",\n \"description\": \"Example List of germplasm\",\n \"listDbId\": \"list2\",\n \"listName\": \"Example List 2\",\n \"listOwnerName\": \"Rob Robertson\",\n \"listOwnerPersonDbId\": \"person2\",\n \"listSize\": 3,\n \"listSource\": \"User Created\",\n \"listType\": \"germplasm\"\n }\n ]\n }\n}"},{"id":"ba400769-f1f2-43c1-a3b0-901e84f389ca","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/lists?listType=&listName=&listDbId=&listSource=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["lists"],"query":[{"key":"listType","value":""},{"key":"listName","value":""},{"key":"listDbId","value":""},{"key":"listSource","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""}],"_postman_id":"a545d643-8014-486e-8567-1046bdbdd61a"},{"name":"Create a New List","id":"8acff905-20c4-4223-90e1-292a805b7284","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"POST","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"listType\": \"\",\n \"data\": [\n \"\",\n \"\"\n ],\n \"description\": \"\",\n \"listName\": \"\",\n \"listOwnerName\": \"\",\n \"listOwnerPersonDbId\": \"\",\n \"listSize\": \"\",\n \"listSource\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/lists","description":"

Create a new list

\n","urlObject":{"path":["lists"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[]}},"response":[{"id":"209c9fd4-1c2d-4f7d-ae13-576b902147e5","name":"Unauthorized","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"listType\": \"\",\n \"data\": [\n \"\",\n \"\"\n ],\n \"description\": \"\",\n \"listName\": \"\",\n \"listOwnerName\": \"\",\n \"listOwnerPersonDbId\": \"\",\n \"listSize\": \"\",\n \"listSource\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/lists"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"2a4b4ba8-f0d3-4cf0-8e97-053c3ebc4019","name":"Forbidden","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"listType\": \"\",\n \"data\": [\n \"\",\n \"\"\n ],\n \"description\": \"\",\n \"listName\": \"\",\n \"listOwnerName\": \"\",\n \"listOwnerPersonDbId\": \"\",\n \"listSize\": \"\",\n \"listSource\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/lists"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"4938f947-04b1-4640-a27e-35ee9d4b8ee8","name":"Bad Request","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"listType\": \"\",\n \"data\": [\n \"\",\n \"\"\n ],\n \"description\": \"\",\n \"listName\": \"\",\n \"listOwnerName\": \"\",\n \"listOwnerPersonDbId\": \"\",\n \"listSize\": \"\",\n \"listSource\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/lists"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"9d58ea75-113a-4a84-bb2d-1bb679e56018","name":"OK","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"listType\": \"\",\n \"data\": [\n \"\",\n \"\"\n ],\n \"description\": \"\",\n \"listName\": \"\",\n \"listOwnerName\": \"\",\n \"listOwnerPersonDbId\": \"\",\n \"listSize\": \"\",\n \"listSource\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/lists"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n \"string\"\n ],\n \"dateCreated\": \"2018-12-05T19:36:04.000Z\",\n \"dateModified\": \"2018-12-05T19:36:04.000Z\",\n \"description\": \"string\",\n \"listDbId\": \"d93d6bb6-dfc3-4d15-8d2e-654c618ce12e\",\n \"listName\": \"string\",\n \"listOwnerName\": \"string\",\n \"listOwnerPersonDbId\": \"string\",\n \"listSize\": 1,\n \"listSource\": \"string\",\n \"listType\": \"germplasm\"\n }\n}"}],"_postman_id":"8acff905-20c4-4223-90e1-292a805b7284"}],"id":"619cf762-f102-40d3-b336-5981a8f0cf9a","_postman_id":"619cf762-f102-40d3-b336-5981a8f0cf9a","description":""},{"name":"locations","item":[{"name":"Get the Locations","id":"39c0510d-1549-42e0-99d8-28d71fe12be2","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/locations?locationType=&page=&pageSize=","description":"

Implemented by: Germinate

\n

Get a list of locations.

\n\n

Note: Consider revising to describe polygon lat/lan points and check if adopting http://geojson.org/ is worth doing for v1.

\n","urlObject":{"path":["locations"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Filter by location type specified.

\n","type":"text/plain"},"key":"locationType","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"6a665cc6-0cfd-4915-a94e-3e13cc56aff5","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/locations?locationType=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["locations"],"query":[{"key":"locationType","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"6fdc84cf-e11b-4cfc-b3b9-8218e06353ea","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/locations?locationType=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["locations"],"query":[{"key":"locationType","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 17,\n \"totalPages\": 9\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"abbreviation\": \"L1\",\n \"abreviation\": \"L1\",\n \"additionalInfo\": {\n \"adm1\": \"Junin\",\n \"adm2\": \"Chanchamayo\",\n \"adm3\": \"San Ramon\",\n \"annualMeanTemperature\": \"23\",\n \"annualTotalPrecipitation\": \"360\",\n \"cont\": \"South America\",\n \"creg\": \"LAC\",\n \"local\": \"San Ramon\"\n },\n \"altitude\": 828,\n \"countryCode\": \"PER\",\n \"countryName\": \"Peru\",\n \"documentationURL\": \"https://brapi.org\",\n \"instituteAddress\": \"71 Pilgrim Avenue Chevy Chase MD 20815\",\n \"instituteAdress\": \"71 Pilgrim Avenue Chevy Chase MD 20815\",\n \"instituteName\": \"Plant Science Institute\",\n \"latitude\": -11.1274995803833,\n \"locationDbId\": \"1\",\n \"locationName\": \"Location 1\",\n \"locationType\": \"Storage location\",\n \"longitude\": -75.35639190673828,\n \"name\": \"Location 1\"\n },\n {\n \"abbreviation\": \"L2\",\n \"abreviation\": \"L2\",\n \"additionalInfo\": {},\n \"altitude\": 964,\n \"countryCode\": \"PER\",\n \"countryName\": \"Peru\",\n \"documentationURL\": \"https://brapi.org\",\n \"instituteAddress\": \"71 Pilgrim Avenue Chevy Chase MD 20815\",\n \"instituteAdress\": \"71 Pilgrim Avenue Chevy Chase MD 20815\",\n \"instituteName\": \"Plant Science Institute\",\n \"latitude\": -11.161160469055176,\n \"locationDbId\": \"2\",\n \"locationName\": \"Location 2\",\n \"locationType\": \"Breeding location\",\n \"longitude\": -75.34171295166016,\n \"name\": \"Location 2\"\n }\n ]\n }\n}"},{"id":"b54e85fb-17fb-4837-8042-aba30845a4f4","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/locations?locationType=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["locations"],"query":[{"key":"locationType","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"febf6f7a-1933-4722-b5f7-32588f9a8856","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/locations?locationType=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["locations"],"query":[{"key":"locationType","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""}],"_postman_id":"39c0510d-1549-42e0-99d8-28d71fe12be2"},{"name":"Get the details of a specific Location","id":"1afcf1b1-e155-4121-bb54-33f63f17b770","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/locations/:locationDbId","description":"

Get details for a location.

\n\n","urlObject":{"path":["locations",":locationDbId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

The internal DB id for a location

\n","type":"text/plain"},"type":"any","value":"","key":"locationDbId"}]}},"response":[{"id":"1fa7b5ca-ef19-4fa0-b664-828af3926d34","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/locations/"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"7049e212-cdf9-4797-8419-2ee23b608d0c","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/locations/"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"894dc587-0a4f-4b19-acc5-7472627b2583","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/locations/"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"ae60e408-7221-4770-9be3-debf1c5b2705","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/locations/"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"c30c3ed2-c542-445e-ab7f-c20b1b53d4cb","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/locations/"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"abbreviation\": \"L1\",\n \"abreviation\": \"L1\",\n \"additionalInfo\": {\n \"adm1\": \"Junin\",\n \"adm2\": \"Chanchamayo\",\n \"adm3\": \"San Ramon\",\n \"annualMeanTemperature\": \"23\",\n \"annualTotalPrecipitation\": \"360\",\n \"cont\": \"South America\",\n \"creg\": \"LAC\",\n \"local\": \"San Ramon\"\n },\n \"altitude\": 828,\n \"countryCode\": \"PER\",\n \"countryName\": \"Peru\",\n \"documentationURL\": \"https://brapi.org\",\n \"instituteAddress\": \"71 Pilgrim Avenue Chevy Chase MD 20815\",\n \"instituteAdress\": \"71 Pilgrim Avenue Chevy Chase MD 20815\",\n \"instituteName\": \"Plant Science Institute\",\n \"latitude\": -11.1274995803833,\n \"locationDbId\": \"1\",\n \"locationName\": \"Location 1\",\n \"locationType\": \"Storage location\",\n \"longitude\": -75.35639190673828,\n \"name\": \"Location 1\"\n }\n}"}],"_postman_id":"1afcf1b1-e155-4121-bb54-33f63f17b770"}],"id":"4808252e-37b0-4594-aea5-ca4d91feb050","_postman_id":"4808252e-37b0-4594-aea5-ca4d91feb050","description":""},{"name":"maps","item":[{"name":"{map Db Id}","item":[{"name":"positions","item":[{"name":"Get the positions of Markers inside a specific Genomic Map","id":"08320406-ce2e-4060-98b3-389fdea5d9d5","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/maps/:mapDbId/positions?linkageGroupId=&linkageGroupName=&page=&pageSize=","description":"

All the markers in a given Map, ordered by linkageGroup and position.

\n","urlObject":{"path":["maps",":mapDbId","positions"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Deprecated Use linkageGroupName instead

\n","type":"text/plain"},"key":"linkageGroupId","value":""},{"description":{"content":"

The chromosome identifier or the generic linkage group identifier if the chromosome is not applicable.

\n","type":"text/plain"},"key":"linkageGroupName","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[{"description":{"content":"

unique id of the map

\n","type":"text/plain"},"type":"any","value":"","key":"mapDbId"}]}},"response":[{"id":"027214ea-4176-4a4e-8b10-0a69b58de2de","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps//positions?linkageGroupId=&linkageGroupName=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps","","positions"],"query":[{"key":"linkageGroupId","value":""},{"key":"linkageGroupName","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"14c83aab-f424-4954-bae2-4b5a0d70f45d","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps//positions?linkageGroupId=&linkageGroupName=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps","","positions"],"query":[{"key":"linkageGroupId","value":""},{"key":"linkageGroupName","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"32fc33b2-dd45-4550-940b-0d029e5b8e25","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps//positions?linkageGroupId=&linkageGroupName=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps","","positions"],"query":[{"key":"linkageGroupId","value":""},{"key":"linkageGroupName","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 11,\n \"totalPages\": 6\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"linkageGroupName\": \"1\",\n \"location\": \"1000\",\n \"markerDbId\": \"mr01\",\n \"markerName\": \"marker1-1\"\n },\n {\n \"linkageGroupName\": \"1\",\n \"location\": \"1020\",\n \"markerDbId\": \"mr02\",\n \"markerName\": \"marker1-2\"\n }\n ]\n }\n}"},{"id":"9f96d0d7-69b1-45b9-8406-a63ae1c54f2d","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps//positions?linkageGroupId=&linkageGroupName=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps","","positions"],"query":[{"key":"linkageGroupId","value":""},{"key":"linkageGroupName","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"b556942e-653b-4a9b-bcd4-4fc69a56ddc5","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps//positions?linkageGroupId=&linkageGroupName=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps","","positions"],"query":[{"key":"linkageGroupId","value":""},{"key":"linkageGroupName","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""}],"_postman_id":"08320406-ce2e-4060-98b3-389fdea5d9d5"},{"name":"Get the positions of Markers inside a specific Linkage Group","id":"367dc689-65ff-4d29-a051-1303eceb663b","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/maps/:mapDbId/positions/:linkageGroupName?min=&max=&page=&pageSize=","description":"

All the markers in a specific Linkage Group (aka Chromasome) inside a particular Map, ordered by position.

\n","urlObject":{"path":["maps",":mapDbId","positions",":linkageGroupName"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

minimum position on linkage group

\n","type":"text/plain"},"key":"min","value":""},{"description":{"content":"

maximum position on linkage group

\n","type":"text/plain"},"key":"max","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[{"description":{"content":"

unique id of the map

\n","type":"text/plain"},"type":"any","value":"","key":"mapDbId"},{"description":{"content":"

The chromosome identifier or the generic linkage group identifier if the chromosome is not applicable.

\n","type":"text/plain"},"type":"any","value":"","key":"linkageGroupName"}]}},"response":[{"id":"39814a97-95b5-4f86-9b41-d7afbe113b15","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps//positions/?min=&max=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps","","positions",""],"query":[{"key":"min","value":""},{"key":"max","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 11,\n \"totalPages\": 6\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"location\": \"1000\",\n \"markerDbId\": \"mr01\",\n \"markerName\": \"marker1-1\"\n },\n {\n \"location\": \"1020\",\n \"markerDbId\": \"mr02\",\n \"markerName\": \"marker1-2\"\n }\n ]\n }\n}"},{"id":"65d43244-1cc9-4476-9ec2-f7cdf0c1dc4b","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps//positions/?min=&max=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps","","positions",""],"query":[{"key":"min","value":""},{"key":"max","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"9866cd01-5158-444a-9088-dee1ba5b1c3a","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps//positions/?min=&max=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps","","positions",""],"query":[{"key":"min","value":""},{"key":"max","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"a9375c9a-f79c-452b-82ac-19ad53d35f4e","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps//positions/?min=&max=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps","","positions",""],"query":[{"key":"min","value":""},{"key":"max","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"b90dced8-c424-4b5a-99ce-ab61affd439a","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps//positions/?min=&max=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps","","positions",""],"query":[{"key":"min","value":""},{"key":"max","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""}],"_postman_id":"367dc689-65ff-4d29-a051-1303eceb663b"}],"id":"f231d43e-c064-464c-9230-abeb3b7da37e","_postman_id":"f231d43e-c064-464c-9230-abeb3b7da37e","description":""},{"name":"Get the details of a specific Genomic Map","id":"4514ad22-6eb9-4643-b5a5-5b32fe9ca180","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/maps/:mapDbId?page=&pageSize=","description":"

Provides the number of markers on each linkageGroup and the max position on the linkageGroup

\n","urlObject":{"path":["maps",":mapDbId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[{"description":{"content":"

The internal db id of a selected map

\n","type":"text/plain"},"type":"any","value":"","key":"mapDbId"}]}},"response":[{"id":"2fdebf6f-18df-4ee0-80d4-088ef9610b99","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps/?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps",""],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"798efd7b-13c8-465a-8206-4fdaccb43326","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps/?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps",""],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"b646cca4-b5ab-40cb-80d8-406aeda7d194","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps/?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps",""],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"c1554254-fd42-4342-9733-c03b6c2394ea","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps/?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps",""],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 1,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"linkageGroupName\": \"1\",\n \"markerCount\": 11,\n \"maxPosition\": 1110\n }\n ],\n \"documentationURL\": \"https://brapi.org\",\n \"linkageGroups\": [\n {\n \"linkageGroupName\": \"1\",\n \"markerCount\": 11,\n \"maxPosition\": 1110\n }\n ],\n \"mapDbId\": \"gm1\",\n \"mapName\": \"Genome Map 1\",\n \"name\": \"Genome Map 1\",\n \"type\": \"Genetic\",\n \"unit\": \"cM\"\n }\n}"},{"id":"d1502211-9b8c-4888-927c-a09c988a963e","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps/?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps",""],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""}],"_postman_id":"4514ad22-6eb9-4643-b5a5-5b32fe9ca180"}],"id":"bba5bf96-3af8-4811-9a2b-b8bbec2a4a8b","_postman_id":"bba5bf96-3af8-4811-9a2b-b8bbec2a4a8b","description":""},{"name":"Get the Genomic Maps","id":"8a7006a4-522c-467d-b8b8-91f7758162f5","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/maps?species=&commonCropName=&scientificName=&type=&page=&pageSize=","description":"

Get list of maps

\n","urlObject":{"path":["maps"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

DEPRECATED in v1.3 - See \"scientificName\"

\n","type":"text/plain"},"key":"species","value":""},{"description":{"content":"

The common name of the crop, found from \"GET /commoncropnames\"

\n","type":"text/plain"},"key":"commonCropName","value":""},{"description":{"content":"

Full scientific binomial format name. This includes Genus, Species, and Sub-species

\n","type":"text/plain"},"key":"scientificName","value":""},{"description":{"content":"

Type of map

\n","type":"text/plain"},"key":"type","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"0975bda1-d75e-4df4-ab00-f66254934421","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps?species=&commonCropName=&scientificName=&type=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps"],"query":[{"key":"species","value":""},{"key":"commonCropName","value":""},{"key":"scientificName","value":""},{"key":"type","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"1c9ac843-110c-4e7d-8da0-381f88f8ee3c","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps?species=&commonCropName=&scientificName=&type=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps"],"query":[{"key":"species","value":""},{"key":"commonCropName","value":""},{"key":"scientificName","value":""},{"key":"type","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"56034e09-6d1d-4082-bb37-24e6027aa8c4","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps?species=&commonCropName=&scientificName=&type=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps"],"query":[{"key":"species","value":""},{"key":"commonCropName","value":""},{"key":"scientificName","value":""},{"key":"type","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 2,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"comments\": \"comments\",\n \"commonCropName\": \"Paw Paw\",\n \"documentationURL\": \"https://brapi.org\",\n \"linkageGroupCount\": 1,\n \"mapDbId\": \"gm1\",\n \"mapName\": \"Genome Map 1\",\n \"markerCount\": 11,\n \"name\": \"Genome Map 1\",\n \"publishedDate\": \"2018-01-01T00:00:00.000Z\",\n \"scientificName\": \"Asimina triloba\",\n \"species\": \"triloba\",\n \"type\": \"Genetic\",\n \"unit\": \"cM\"\n },\n {\n \"comments\": \"comments\",\n \"commonCropName\": \"Paw Paw\",\n \"documentationURL\": \"https://brapi.org\",\n \"linkageGroupCount\": 2,\n \"mapDbId\": \"gm2\",\n \"mapName\": \"Genome Map 2\",\n \"markerCount\": 11,\n \"name\": \"Genome Map 2\",\n \"publishedDate\": \"2018-01-01T00:00:00.000Z\",\n \"scientificName\": \"Asimina triloba\",\n \"species\": \"triloba\",\n \"type\": \"Genetic\",\n \"unit\": \"cM\"\n }\n ]\n }\n}"},{"id":"5f8ce83f-0181-4cd1-945f-1fb21706f3bb","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/maps?species=&commonCropName=&scientificName=&type=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["maps"],"query":[{"key":"species","value":""},{"key":"commonCropName","value":""},{"key":"scientificName","value":""},{"key":"type","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""}],"_postman_id":"8a7006a4-522c-467d-b8b8-91f7758162f5"}],"id":"91e8364e-dfe5-42dd-9ac5-fe00d7cf2f8a","_postman_id":"91e8364e-dfe5-42dd-9ac5-fe00d7cf2f8a","description":""},{"name":"markerprofiles","item":[{"name":"Get the Marker Profiles","id":"e87b1b25-cb86-4c8f-8b2e-b1372118f7c6","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/markerprofiles?germplasmDbId=&studyDbId=&sampleDbId=&extractDbId=&page=&pageSize=","description":"

For the requested Germplasm Id and/or Extract Id, returns the Markerprofile Id and number of non-missing allele calls (marker/allele pairs).

\n","urlObject":{"path":["markerprofiles"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

The server's internal ids for the Germplasm IDs, as returned by the Find marker profile by Germplasm service.

\n","type":"text/plain"},"key":"germplasmDbId","value":""},{"description":{"content":"

The server's internal id for the StudyDbId

\n","type":"text/plain"},"key":"studyDbId","value":""},{"description":{"content":"

The server's internal id for the SampleDbId

\n","type":"text/plain"},"key":"sampleDbId","value":""},{"description":{"content":"

The server's internal id for the ExtractDbId

\n","type":"text/plain"},"key":"extractDbId","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"c14a4c3a-1cae-4ab4-8209-99869669e361","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/markerprofiles?germplasmDbId=&studyDbId=&sampleDbId=&extractDbId=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["markerprofiles"],"query":[{"key":"germplasmDbId","value":""},{"key":"studyDbId","value":""},{"key":"sampleDbId","value":""},{"key":"extractDbId","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"ed6d1eff-f2e9-4f76-83fe-236b81096d74","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/markerprofiles?germplasmDbId=&studyDbId=&sampleDbId=&extractDbId=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["markerprofiles"],"query":[{"key":"germplasmDbId","value":""},{"key":"studyDbId","value":""},{"key":"sampleDbId","value":""},{"key":"extractDbId","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 14,\n \"totalPages\": 7\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"analysisMethod\": \"GBS\",\n \"extractDbId\": \"extract1\",\n \"germplasmDbId\": \"1\",\n \"markerProfileDbId\": \"P1\",\n \"markerprofileDbId\": \"P1\",\n \"resultCount\": 20,\n \"sampleDbId\": \"sam00\",\n \"uniqueDisplayName\": \"My Fancy Germplasm\"\n },\n {\n \"analysisMethod\": \"GBS\",\n \"extractDbId\": \"extract2\",\n \"germplasmDbId\": \"1\",\n \"markerProfileDbId\": \"P2\",\n \"markerprofileDbId\": \"P2\",\n \"resultCount\": 20,\n \"sampleDbId\": \"sam01\",\n \"uniqueDisplayName\": \"My Fancy Germplasm\"\n }\n ]\n }\n}"},{"id":"f0ef9a50-3b7f-41d6-8818-2dec08bd0313","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/markerprofiles?germplasmDbId=&studyDbId=&sampleDbId=&extractDbId=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["markerprofiles"],"query":[{"key":"germplasmDbId","value":""},{"key":"studyDbId","value":""},{"key":"sampleDbId","value":""},{"key":"extractDbId","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"f8386475-3cbd-4a9c-8efb-41eea6bbcf79","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/markerprofiles?germplasmDbId=&studyDbId=&sampleDbId=&extractDbId=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["markerprofiles"],"query":[{"key":"germplasmDbId","value":""},{"key":"studyDbId","value":""},{"key":"sampleDbId","value":""},{"key":"extractDbId","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""}],"_postman_id":"e87b1b25-cb86-4c8f-8b2e-b1372118f7c6"},{"name":"Get the details for a specific Marker Profile","id":"8dd15e78-9ed9-4194-8c5a-d7670a1232e9","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/markerprofiles/:markerProfileDbId?expandHomozygotes=&unknownString=&sepPhased=&sepUnphased=&page=&pageSize=","description":"

For the requested marker profile ID, returns the allele call for each marker.

\n

Allele encodings

\n
    \n

  • Unknown data will by default be encoded by \"N\"

    \n
    • \n

  • Homozygotes are returned as a single occurance, e.g. AA -> A, GG -> G

    \n
    • \n

  • Phased heterozygotes are by default separated by a pipe (\"|\") and unphased heterozygotes are by default separated by a forward slash (\"/\")

    \n
    • \n

  • Dominant markers such as DArTs: 1 for present, 0 for absent

    \n
    • \n

  • If the user would like to use an empty string (\"\") for any of the parameters, the value should be set to the reserved word \"empty_string\", e.g. sepUnphased=empty_string.

    \n
    • \n
\n

Open issue: The pages of data will need to be sorted sensibly in order for the requested page to be delivered consistently. By map or genome position? Alphabetically?'\"

\n","urlObject":{"path":["markerprofiles",":markerProfileDbId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Should homozygotes NOT be collapsed into a single orrucance?

\n","type":"text/plain"},"key":"expandHomozygotes","value":""},{"description":{"content":"

The string to use as a representation for missing data or the reserved word \"empty_string\".

\n","type":"text/plain"},"key":"unknownString","value":""},{"description":{"content":"

The string to use as a separator for phased allele calls or the reserved word \"empty_string\".

\n","type":"text/plain"},"key":"sepPhased","value":""},{"description":{"content":"

The string to use as a separator for unphased allele calls or the reserved word \"empty_string\".

\n","type":"text/plain"},"key":"sepUnphased","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[{"description":{"content":"

The server's internal id for the marker profile

\n","type":"text/plain"},"type":"any","value":"","key":"markerProfileDbId"}]}},"response":[{"id":"3acbc9b4-5900-42e1-9dfa-11d5e595e8ec","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/markerprofiles/?expandHomozygotes=&unknownString=&sepPhased=&sepUnphased=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["markerprofiles",""],"query":[{"key":"expandHomozygotes","value":""},{"key":"unknownString","value":""},{"key":"sepPhased","value":""},{"key":"sepUnphased","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 20,\n \"totalPages\": 10\n },\n \"status\": []\n },\n \"result\": {\n \"analysisMethod\": \"GBS\",\n \"data\": [\n {\n \"marker1-1\": \"A\"\n },\n {\n \"marker1-2\": \"C\"\n }\n ],\n \"extractDbId\": \"extract1\",\n \"germplasmDbId\": \"1\",\n \"markerProfileDbId\": \"P1\",\n \"markerprofileDbId\": \"P1\",\n \"uniqueDisplayName\": \"My Fancy Germplasm\"\n }\n}"},{"id":"3f929299-e616-4cf5-91dc-ebae06143be7","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/markerprofiles/?expandHomozygotes=&unknownString=&sepPhased=&sepUnphased=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["markerprofiles",""],"query":[{"key":"expandHomozygotes","value":""},{"key":"unknownString","value":""},{"key":"sepPhased","value":""},{"key":"sepUnphased","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"98853927-710a-4f07-8929-b2d16f6f4600","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/markerprofiles/?expandHomozygotes=&unknownString=&sepPhased=&sepUnphased=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["markerprofiles",""],"query":[{"key":"expandHomozygotes","value":""},{"key":"unknownString","value":""},{"key":"sepPhased","value":""},{"key":"sepUnphased","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"bd5c6e73-2a42-497b-a347-e8e5de8ff154","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/markerprofiles/?expandHomozygotes=&unknownString=&sepPhased=&sepUnphased=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["markerprofiles",""],"query":[{"key":"expandHomozygotes","value":""},{"key":"unknownString","value":""},{"key":"sepPhased","value":""},{"key":"sepUnphased","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"f8d034b0-aeea-40bd-835d-0b94bbb6794f","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/markerprofiles/?expandHomozygotes=&unknownString=&sepPhased=&sepUnphased=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["markerprofiles",""],"query":[{"key":"expandHomozygotes","value":""},{"key":"unknownString","value":""},{"key":"sepPhased","value":""},{"key":"sepUnphased","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""}],"_postman_id":"8dd15e78-9ed9-4194-8c5a-d7670a1232e9"}],"id":"7b110a6f-b692-4f8a-aa52-096aea2bfc5a","_postman_id":"7b110a6f-b692-4f8a-aa52-096aea2bfc5a","description":""},{"name":"markers","item":[{"name":"Get the Markers","id":"9d14ba05-6443-4bf8-b4e7-8bb9fcd5d96f","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/markers?markerDbId=&markerName=&name=&matchMethod=&includeSynonyms=&include=&type=&page=&pageSize=","description":"

Other service requests use the servers internal markerDbId. This service returns marker records that provide the markerDbId. For the requested name or synonym, returns an array (possibly empty) of marker records that match the search criteria.\nIf there is none, an empty array is returned. If there is one or more than one match, returns an array of all marker records that match the search criteria.

\n","urlObject":{"path":["markers"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

The database ID of the markers to search for

\n","type":"text/plain"},"key":"markerDbId","value":""},{"description":{"content":"

The search paramater for a marker name or synonym.

\n","type":"text/plain"},"key":"markerName","value":""},{"description":{"content":"

DEPRECAED in v1.3 - see \"markerName\"

\n","type":"text/plain"},"key":"name","value":""},{"description":{"content":"

DEPRECAED in v1.3 - see /search/markers

\n","type":"text/plain"},"key":"matchMethod","value":""},{"description":{"content":"

Whether to include synonyms in the output.

\n","type":"text/plain"},"key":"includeSynonyms","value":""},{"description":{"content":"

DEPRECATED in v1.1 - see \"includeSynonyms\"

\n","type":"text/plain"},"key":"include","value":""},{"description":{"content":"

The type of the marker.

\n","type":"text/plain"},"key":"type","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"1b4598ca-bf3e-4699-8a26-d43e9b183505","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/markers?markerDbId=&markerName=&name=&matchMethod=&includeSynonyms=&include=&type=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["markers"],"query":[{"key":"markerDbId","value":""},{"key":"markerName","value":""},{"key":"name","value":""},{"key":"matchMethod","value":""},{"key":"includeSynonyms","value":""},{"key":"include","value":""},{"key":"type","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"5fc84fca-6005-4193-9543-4e8f33b54f4c","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/markers?markerDbId=&markerName=&name=&matchMethod=&includeSynonyms=&include=&type=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["markers"],"query":[{"key":"markerDbId","value":""},{"key":"markerName","value":""},{"key":"name","value":""},{"key":"matchMethod","value":""},{"key":"includeSynonyms","value":""},{"key":"include","value":""},{"key":"type","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"66e1bcef-248f-4e59-82f9-940de4ee4e0f","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/markers?markerDbId=&markerName=&name=&matchMethod=&includeSynonyms=&include=&type=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["markers"],"query":[{"key":"markerDbId","value":""},{"key":"markerName","value":""},{"key":"name","value":""},{"key":"matchMethod","value":""},{"key":"includeSynonyms","value":""},{"key":"include","value":""},{"key":"type","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 2,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"analysisMethods\": [\n \"illumina\"\n ],\n \"defaultDisplayName\": \"marker1-1\",\n \"markerDbId\": \"mr01\",\n \"markerName\": \"marker1-1\",\n \"refAlt\": [\n \"A\",\n \"T\"\n ],\n \"synonyms\": [\n \"i_11_10010\"\n ],\n \"type\": \"marker\"\n },\n {\n \"analysisMethods\": [\n \"kasp\"\n ],\n \"defaultDisplayName\": \"marker1-2\",\n \"markerDbId\": \"mr02\",\n \"markerName\": \"marker1-2\",\n \"refAlt\": [\n \"A\",\n \"T\"\n ],\n \"synonyms\": [\n \"i_11_10020\"\n ],\n \"type\": \"marker\"\n }\n ]\n }\n}"},{"id":"d236439a-cbd9-4e41-afd5-ca065a7160f6","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/markers?markerDbId=&markerName=&name=&matchMethod=&includeSynonyms=&include=&type=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["markers"],"query":[{"key":"markerDbId","value":""},{"key":"markerName","value":""},{"key":"name","value":""},{"key":"matchMethod","value":""},{"key":"includeSynonyms","value":""},{"key":"include","value":""},{"key":"type","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""}],"_postman_id":"9d14ba05-6443-4bf8-b4e7-8bb9fcd5d96f"},{"name":"Get the details for a specific Marker","id":"385cb3be-8eca-4a21-a95b-bcdb4a5a997b","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/markers/:markerDbId","description":"

Status: ACCEPTED \nImplemented By:

\n","urlObject":{"path":["markers",":markerDbId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

the internal id of the marker

\n","type":"text/plain"},"type":"any","value":"","key":"markerDbId"}]}},"response":[{"id":"2becb24d-ea20-4282-964a-cad04d512c16","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/markers/"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"389c14c3-0d14-4a32-afcc-164f5d2ff73a","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/markers/"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"4aa6ea3c-d471-43da-acc3-e885ce4f9c1c","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/markers/"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"547b659f-aef2-475b-b2f0-ee238bce99e3","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/markers/"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"bc623b90-0a22-47d4-a62a-a1a294490394","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/markers/"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"analysisMethods\": [\n \"kasp\"\n ],\n \"defaultDisplayName\": \"marker1-2\",\n \"markerDbId\": \"mr02\",\n \"markerName\": \"marker1-2\",\n \"refAlt\": [\n \"A\",\n \"T\"\n ],\n \"synonyms\": [\n \"i_11_10020\"\n ],\n \"type\": \"marker\"\n }\n}"}],"_postman_id":"385cb3be-8eca-4a21-a95b-bcdb4a5a997b"}],"id":"c135669e-e756-4780-8da0-ae28cf62cbb9","_postman_id":"c135669e-e756-4780-8da0-ae28cf62cbb9","description":""},{"name":"markers-search","item":[{"name":"Markers Search (GET)","id":"bf304428-df31-4ad9-b4d6-e9343e6d5b4c","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[],"url":"https://test-server.brapi.org/brapi/v1/markers-search?markerDbIds=&markerDbIds=&name=&matchMethod=&includeSynonyms=&type=&page=&pageSize=","description":"

Scope: CORE. Status: ACCEPTED.\nImplemented by: Germinate\nSee Search Services for additional implementation details.\nOther service requests use the servers internal markerDbId. This service returns marker records that provide the markerDbId. For the requested name or synonym, returns an array (possibly empty) of marker records that match the search criteria. - If there is none, an empty array is returned. - If there is one or more than one match, returns an array of all marker records that match the search criteria.

\n","urlObject":{"path":["markers-search"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

The database IDs of the markers to search for

\n","type":"text/plain"},"key":"markerDbIds","value":""},{"description":{"content":"

The database IDs of the markers to search for

\n","type":"text/plain"},"key":"markerDbIds","value":""},{"description":{"content":"

The search pattern for a marker name or synonym. Examples: \"11_10002\" \"11_1%\" \"11_1*\" \"11_10?02\"

\n","type":"text/plain"},"key":"name","value":""},{"description":{"content":"

Possible values are 'case_insensitive', 'exact'\n(case sensitive), 'wildcard' (which is case insensitive). Wildcard uses both '*' and '%' for any number of characters\nand '?' for one character matching. Default is exact.

\n","type":"text/plain"},"key":"matchMethod","value":""},{"description":{"content":"

Whether to include synonyms in the output.

\n","type":"text/plain"},"key":"includeSynonyms","value":""},{"description":{"content":"

The type of the marker.

\n","type":"text/plain"},"key":"type","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"8f68c5e8-c865-4f02-9fde-9f564088e7b0","name":"OK","originalRequest":{"method":"GET","header":[],"url":{"raw":"https://test-server.brapi.org/brapi/v1/markers-search?markerDbIds=&markerDbIds=&name=&matchMethod=&includeSynonyms=&type=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["markers-search"],"query":[{"key":"markerDbIds","value":""},{"key":"markerDbIds","value":""},{"key":"name","value":""},{"key":"matchMethod","value":""},{"key":"includeSynonyms","value":""},{"key":"type","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 2,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"analysisMethods\": [\n \"illumina\"\n ],\n \"defaultDisplayName\": \"marker1-1\",\n \"markerDbId\": \"mr01\",\n \"markerName\": \"marker1-1\",\n \"refAlt\": [\n \"A\",\n \"T\"\n ],\n \"synonyms\": [\n \"i_11_10010\"\n ],\n \"type\": \"marker\"\n },\n {\n \"analysisMethods\": [\n \"kasp\"\n ],\n \"defaultDisplayName\": \"marker1-2\",\n \"markerDbId\": \"mr02\",\n \"markerName\": \"marker1-2\",\n \"refAlt\": [\n \"A\",\n \"T\"\n ],\n \"synonyms\": [\n \"i_11_10020\"\n ],\n \"type\": \"marker\"\n }\n ]\n }\n}"}],"_postman_id":"bf304428-df31-4ad9-b4d6-e9343e6d5b4c"},{"name":"Markers Search (POST)","id":"9a1d123c-66bf-49a1-9da7-81b938b5d59d","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"POST","header":[{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"includeSynonyms\": \"\",\n \"markerDbIds\": [\n \"\",\n \"\"\n ],\n \"markerNames\": [\n \"\",\n \"\"\n ],\n \"matchMethod\": \"\",\n \"name\": \"\",\n \"page\": \"\",\n \"pageSize\": \"\",\n \"type\": \"\",\n \"types\": [\n \"\",\n \"\"\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/markers-search","description":"

Scope: CORE. Status: ACCEPTED.\nImplemented by: Germinate\nSee Search Services for additional implementation details.\nOther service requests use the servers internal markerDbId. This service returns marker records that provide the markerDbId. For the requested name or synonym, returns an array (possibly empty) of marker records that match the search criteria. - If there is none, an empty array is returned. - If there is one or more than one match, returns an array of all marker records that match the search criteria.

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Update the details of an existing method

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HTTP HEADER - Token used for Authorization

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An Observation Variable has 3 critical parts: A Trait being observed, a Method for making the observation, and a Scale on which the observation can be measured and compared with other observations.

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Create a new method object in the database

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Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"class\": \"\",\n \"description\": \"\",\n \"formula\": \"\",\n \"methodName\": \"\",\n \"ontologyReference\": {\n \"ontologyName\": \"\",\n \"documentationLinks\": [\n {\n \"type\": \"\"\n },\n {\n \"type\": \"\"\n }\n ],\n \"ontologyDbId\": \"\",\n \"version\": \"\"\n },\n \"reference\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/methods"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"b624d049-d092-4bd1-b996-d92dbb1261ba","name":"Unauthorized","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"class\": \"\",\n \"description\": \"\",\n \"formula\": \"\",\n \"methodName\": \"\",\n \"ontologyReference\": {\n \"ontologyName\": \"\",\n \"documentationLinks\": [\n {\n \"type\": \"\"\n },\n {\n \"type\": \"\"\n }\n ],\n \"ontologyDbId\": \"\",\n \"version\": \"\"\n },\n \"reference\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/methods"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""}],"_postman_id":"de0a6be6-732a-4135-bb73-c0cdd11237e7"}],"id":"e47a3b38-bc05-4a4e-8ece-b5488a607834","_postman_id":"e47a3b38-bc05-4a4e-8ece-b5488a607834","description":""},{"name":"people","item":[{"name":"{person Db Id}","item":[{"name":"Get the details for a specific Person","id":"b85f5cc0-1707-4b42-b71b-136be75249fa","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/people/:personDbId","description":"

Get a specific person

\n","urlObject":{"path":["people",":personDbId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

The unique ID of a person

\n","type":"text/plain"},"type":"any","value":"","key":"personDbId"}]}},"response":[{"id":"1e9a31b4-20c2-47ca-a1a0-ed19b1da3ddb","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/people/"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"23f259ec-e717-427f-a9ff-04ebbc4b49d3","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/people/"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"description\": \"Example Person\",\n \"emailAddress\": \"bob@bob.com\",\n \"firstName\": \"Bob\",\n \"lastName\": \"Robertson\",\n \"mailingAddress\": \"123 Road Street, City, State, Country, 98765\",\n \"middleName\": \"Danger\",\n \"personDbId\": \"person1\",\n \"phoneNumber\": 19876543210,\n \"userID\": \"bdr45\"\n }\n}"},{"id":"32109fc7-b495-4814-8e95-363e8d0573f4","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/people/"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"4f1aa75c-f695-4438-92b3-d229893546bf","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/people/"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"9018fae0-a583-44ed-a2fa-a1c90e771db6","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/people/"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""}],"_postman_id":"b85f5cc0-1707-4b42-b71b-136be75249fa"},{"name":"Update a Person","id":"822b94ca-2e5d-40f4-9cb0-06d74d29a880","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"PUT","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"description\": \"\",\n \"emailAddress\": \"\",\n \"firstName\": \"\",\n \"lastName\": \"\",\n \"mailingAddress\": \"\",\n \"middleName\": \"\",\n \"phoneNumber\": \"\",\n \"userID\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/people/:personDbId","description":"

Update an existing Person

\n","urlObject":{"path":["people",":personDbId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

The unique ID of a person

\n","type":"text/plain"},"type":"any","value":"","key":"personDbId"}]}},"response":[{"id":"0c8fb852-aff6-4f55-ae8f-f3ac3e05a11b","name":"Not Found","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"description\": \"\",\n \"emailAddress\": \"\",\n \"firstName\": \"\",\n \"lastName\": \"\",\n \"mailingAddress\": \"\",\n \"middleName\": \"\",\n \"phoneNumber\": \"\",\n \"userID\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/people/"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"18286625-f748-401f-9afe-ca7d89597eca","name":"Unauthorized","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"description\": \"\",\n \"emailAddress\": \"\",\n \"firstName\": \"\",\n \"lastName\": \"\",\n \"mailingAddress\": \"\",\n \"middleName\": \"\",\n \"phoneNumber\": \"\",\n \"userID\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/people/"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"607a41f9-ee2f-422b-8c81-a4ce01b1e73e","name":"OK","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"description\": \"\",\n \"emailAddress\": \"\",\n \"firstName\": \"\",\n \"lastName\": \"\",\n \"mailingAddress\": \"\",\n \"middleName\": \"\",\n \"phoneNumber\": \"\",\n \"userID\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/people/"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"description\": \"string\",\n \"emailAddress\": \"string\",\n \"firstName\": \"Name\",\n \"lastName\": \"Nameson\",\n \"mailingAddress\": \"string\",\n \"middleName\": \"string\",\n \"personDbId\": \"person1\",\n \"phoneNumber\": \"string\",\n \"userID\": \"string\"\n }\n}"},{"id":"774de9b6-6350-4318-b4cf-3b446519d35e","name":"Bad Request","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"description\": \"\",\n \"emailAddress\": \"\",\n \"firstName\": \"\",\n \"lastName\": \"\",\n \"mailingAddress\": \"\",\n \"middleName\": \"\",\n \"phoneNumber\": \"\",\n \"userID\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/people/"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"7ee74d16-c891-4414-a4bf-e0807d3dbfae","name":"Forbidden","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"description\": \"\",\n \"emailAddress\": \"\",\n \"firstName\": \"\",\n \"lastName\": \"\",\n \"mailingAddress\": \"\",\n \"middleName\": \"\",\n \"phoneNumber\": \"\",\n \"userID\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/people/"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""}],"_postman_id":"822b94ca-2e5d-40f4-9cb0-06d74d29a880"}],"id":"564640e3-94a6-461e-8cd1-75382a18e95e","_postman_id":"564640e3-94a6-461e-8cd1-75382a18e95e","description":""},{"name":"Get the People","id":"161b8d35-2e7c-4ae7-aae9-c6bc04bc0430","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/people?firstName=&lastName=&personDbId=&userID=&page=&pageSize=","description":"

Get filtered list of people

\n","urlObject":{"path":["people"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

A persons first name

\n","type":"text/plain"},"key":"firstName","value":""},{"description":{"content":"

A persons last name

\n","type":"text/plain"},"key":"lastName","value":""},{"description":{"content":"

The unique ID of a person

\n","type":"text/plain"},"key":"personDbId","value":""},{"description":{"content":"

A systems user ID ascociated with this person. Different from personDbId because you could have a person who is not a user of the system.

\n","type":"text/plain"},"key":"userID","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"35ea5a1e-bf2e-41df-9eff-95f089ec13de","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/people?firstName=&lastName=&personDbId=&userID=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["people"],"query":[{"key":"firstName","value":""},{"key":"lastName","value":""},{"key":"personDbId","value":""},{"key":"userID","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 2,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"description\": \"Example Person\",\n \"emailAddress\": \"bob@bob.com\",\n \"firstName\": \"Bob\",\n \"lastName\": \"Robertson\",\n \"mailingAddress\": \"123 Road Street, City, State, Country, 98765\",\n \"middleName\": \"Danger\",\n \"personDbId\": \"person1\",\n \"phoneNumber\": 19876543210,\n \"userID\": \"bdr45\"\n },\n {\n \"description\": \"Example Person\",\n \"emailAddress\": \"rob@bob.com\",\n \"firstName\": \"Rob\",\n \"lastName\": \"Robertson\",\n \"mailingAddress\": \"123 Road Street, City, State, Country, 98765\",\n \"middleName\": \"Danger\",\n \"personDbId\": \"person2\",\n \"phoneNumber\": 19876543210,\n \"userID\": \"rdr45\"\n }\n ]\n }\n}"},{"id":"373abd80-d2e8-425f-a8b6-d7b84bae502a","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/people?firstName=&lastName=&personDbId=&userID=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["people"],"query":[{"key":"firstName","value":""},{"key":"lastName","value":""},{"key":"personDbId","value":""},{"key":"userID","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"9619f49b-18c4-4231-a7a5-9837754ea66a","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/people?firstName=&lastName=&personDbId=&userID=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["people"],"query":[{"key":"firstName","value":""},{"key":"lastName","value":""},{"key":"personDbId","value":""},{"key":"userID","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"f58b4fc7-9d23-4ebc-a978-71c11322d208","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/people?firstName=&lastName=&personDbId=&userID=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["people"],"query":[{"key":"firstName","value":""},{"key":"lastName","value":""},{"key":"personDbId","value":""},{"key":"userID","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""}],"_postman_id":"161b8d35-2e7c-4ae7-aae9-c6bc04bc0430"},{"name":"Create a new Person","id":"3101787d-289e-488e-b548-65d90cc9b69d","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"POST","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"description\": \"\",\n \"emailAddress\": \"\",\n \"firstName\": \"\",\n \"lastName\": \"\",\n \"mailingAddress\": \"\",\n \"middleName\": \"\",\n \"phoneNumber\": \"\",\n \"userID\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/people","description":"

Create a new person

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DEPRECATED in v1.3 - See GET /observationunits

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The name or synonym of external genebank accession identifiers

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The ID of traits, could be ontology ID, database ID or PUI

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The database ID / PK of the studies search parameter

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locations these traits were collected

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trial to search across

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program that have phenotyped this trait

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The year or Phenotyping campaign of a multi-annual study (trees, grape, ...)

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The type of the observationUnit. Returns only the observation unit of the specified type; the parent levels ID can be accessed through observationUnitStructure.

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Timestamp range start

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Timestamp range end

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Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

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The size of the pages to be returned. Default is 1000.

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DEPRECATED in v1.3 - See /search/observationunits

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DEPRECATED in v1.3 - See /search/observationtables

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DEPRECATED in v1.3 - See /search/observationtables

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DEPRECATED in v1.3 - See /search/observationtables

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HTTP HEADER - Token used for Authorization

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Bearer {token_string}

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Used to retrieve list of Samples from a Sample Tracking system based on some search criteria.

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the internal DB id for a sample

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the internal DB id for an observation unit where a sample was taken from

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the internal DB id for a plate of samples

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the internal DB id for a germplasm

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Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

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The size of the pages to be returned. Default is 1000.

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HTTP HEADER - Token used for Authorization

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Bearer {token_string}

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Call to register the event of a sample being taken. Sample ID is assigned as a result of the operation and returned in response.

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HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/samples/:sampleDbId","description":"

Used to retrieve the details of a single Sample from a Sample Tracking system.

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the internal DB id for a sample

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DEPRECATED in v1.3 - see GET /samples

\n","urlObject":{"path":["samples-search"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

the internal DB id for a sample

\n","type":"text/plain"},"key":"sampleDbId","value":""},{"description":{"content":"

the internal DB id for an observation unit where a sample was taken from

\n","type":"text/plain"},"key":"observationUnitDbId","value":""},{"description":{"content":"

the internal DB id for a plate of samples

\n","type":"text/plain"},"key":"plateDbId","value":""},{"description":{"content":"

the internal DB id for a germplasm

\n","type":"text/plain"},"key":"germplasmDbId","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

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The size of the pages to be returned. Default is 1000.

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Bearer {token_string}

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Retrieve details about a specific scale

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Update the details of an existing scale

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Id of the scale to retrieve details of.

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HTTP HEADER - Token used for Authorization

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Bearer {token_string}

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Returns a list of Scales available on a server.

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An Observation Variable has 3 critical parts: A Trait being observed, a Method for making the observation, and a Scale on which the observation can be measured and compared with other observations.

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Create a new scale object in the database

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2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"fc19c80b-0173-431d-811e-98afb8f44a46","name":"OK","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"dataType\": \"\",\n \"decimalPlaces\": \"\",\n \"ontologyReference\": {\n \"ontologyName\": \"\",\n \"documentationLinks\": [\n {\n \"URL\": \"\",\n \"type\": \"\"\n },\n {\n \"URL\": \"\",\n \"type\": \"\"\n }\n ],\n \"ontologyDbId\": \"\",\n \"version\": \"\"\n },\n \"scaleName\": \"\",\n \"validValues\": {\n \"categories\": [\n \"\",\n \"\"\n ],\n \"max\": \"\",\n \"min\": \"\"\n },\n \"xref\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/scales"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"dataType\": \"Code\",\n \"decimalPlaces\": 0,\n \"name\": \"string\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"string\",\n \"type\": \"OBO\",\n \"url\": \"string\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"scaleDbId\": \"90fdedbc-6412-47ac-877b-81dd466fe6d2\",\n \"scaleName\": \"string\",\n \"validValues\": {\n \"categories\": [\n \"string\"\n ],\n \"max\": 0,\n \"min\": 0\n },\n \"xref\": \"string\"\n }\n}"}],"_postman_id":"088d8aa7-fa93-4a9d-8e6e-debfcd98a378"}],"id":"ba4fa38d-fdc8-4f46-9d1d-f5e926042534","_postman_id":"ba4fa38d-fdc8-4f46-9d1d-f5e926042534","description":""},{"name":"search","item":[{"name":"germplasm","item":[{"name":"Submit a search request for Germplasm","id":"03cbb4cd-fba3-4dc5-ac52-5a84845dc885","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"POST","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"accessionNumbers\": [\n \"\",\n \"\"\n ],\n \"commonCropNames\": [\n \"\",\n \"\"\n ],\n \"germplasmDbIds\": [\n \"\",\n \"\"\n ],\n \"germplasmGenus\": [\n \"\",\n \"\"\n ],\n \"germplasmNames\": [\n \"\",\n \"\"\n ],\n \"germplasmPUIs\": [\n \"\",\n \"\"\n ],\n \"germplasmSpecies\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/germplasm","description":"

Search for a set of germplasm based on some criteria

\n

Addresses these needs

\n
    \n

  • General germplasm search mechanism that accepts POST for complex queries

    \n
    • \n

  • Possibility to search germplasm by more parameters than those allowed by the existing germplasm search

    \n
    • \n

  • Possibility to get MCPD details by PUID rather than dbId

    \n
    • \n
\n

See Search Services for additional implementation details.

\n","urlObject":{"path":["search","germplasm"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[]}},"response":[{"id":"5dfdd325-f716-4e36-9559-c44a7facff3e","name":"OK","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"accessionNumbers\": [\n \"\",\n \"\"\n ],\n \"commonCropNames\": [\n \"\",\n \"\"\n ],\n \"germplasmDbIds\": [\n \"\",\n \"\"\n ],\n \"germplasmGenus\": [\n \"\",\n \"\"\n ],\n \"germplasmNames\": [\n \"\",\n \"\"\n ],\n \"germplasmPUIs\": [\n \"\",\n \"\"\n ],\n \"germplasmSpecies\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/germplasm"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"searchResultDbId\": \"551ae08c-4548-4bde-ad70-f23beb25e2ea\"\n }\n}"},{"id":"88b5673e-dcc2-4143-8d2e-50b288620154","name":"Bad Request","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"accessionNumbers\": [\n \"\",\n \"\"\n ],\n \"commonCropNames\": [\n \"\",\n \"\"\n ],\n \"germplasmDbIds\": [\n \"\",\n \"\"\n ],\n \"germplasmGenus\": [\n \"\",\n \"\"\n ],\n \"germplasmNames\": [\n \"\",\n \"\"\n ],\n \"germplasmPUIs\": [\n \"\",\n \"\"\n ],\n \"germplasmSpecies\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/germplasm"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"933ba4ca-862c-4f66-b625-a772ba51bbe4","name":"Forbidden","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"accessionNumbers\": [\n \"\",\n \"\"\n ],\n \"commonCropNames\": [\n \"\",\n \"\"\n ],\n \"germplasmDbIds\": [\n \"\",\n \"\"\n ],\n \"germplasmGenus\": [\n \"\",\n \"\"\n ],\n \"germplasmNames\": [\n \"\",\n \"\"\n ],\n \"germplasmPUIs\": [\n \"\",\n \"\"\n ],\n \"germplasmSpecies\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/germplasm"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"f75e6698-e532-4ab7-93d6-31a8521197c4","name":"Unauthorized","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"accessionNumbers\": [\n \"\",\n \"\"\n ],\n \"commonCropNames\": [\n \"\",\n \"\"\n ],\n \"germplasmDbIds\": [\n \"\",\n \"\"\n ],\n \"germplasmGenus\": [\n \"\",\n \"\"\n ],\n \"germplasmNames\": [\n \"\",\n \"\"\n ],\n \"germplasmPUIs\": [\n \"\",\n \"\"\n ],\n \"germplasmSpecies\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/germplasm"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""}],"_postman_id":"03cbb4cd-fba3-4dc5-ac52-5a84845dc885"},{"name":"Get the results of a Germplasm search request","id":"7fc9260d-ec21-4c73-932f-8e32d92bc998","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/search/germplasm/:searchResultsDbId?page=&pageSize=","description":"

See Search Services for additional implementation details.\nAddresses these needs: 1. General germplasm search mechanism that accepts POST for complex queries 2. possibility to search germplasm by more parameters than those allowed by the existing germplasm search 3. possibility to get MCPD details by PUID rather than dbId

\n","urlObject":{"path":["search","germplasm",":searchResultsDbId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[{"description":{"content":"

Permanent unique identifier which references the search results

\n","type":"text/plain"},"type":"any","value":"","key":"searchResultsDbId"}]}},"response":[{"id":"03658ef1-9fd5-440a-a357-9e7f235a1500","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/search/germplasm/?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["search","germplasm",""],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"05cb8fee-3ad1-4516-945d-c833f15e9ba8","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/search/germplasm/?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["search","germplasm",""],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"18e17fc4-3407-41e2-a641-43a1f280bc83","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/search/germplasm/?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["search","germplasm",""],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"60513a95-3d96-4d70-8bf2-2a13e810f52c","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - 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HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"descriptiveOntologyTerms\": [\n \"\",\n \"\"\n ],\n \"imageFileNames\": [\n \"\",\n \"\"\n ],\n \"imageFileSizeMax\": \"\",\n \"imageFileSizeMin\": \"\",\n \"imageHeightMax\": \"\",\n \"imageHeightMin\": \"\",\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n \"\",\n \"\"\n ],\n \"type\": \"\"\n },\n \"type\": \"\"\n },\n \"imageNames\": [\n \"\",\n \"\"\n ],\n \"imageTimeStampRangeEnd\": \"\",\n \"imageTimeStampRangeStart\": \"\",\n \"imageWidthMax\": \"\",\n \"imageWidthMin\": \"\",\n \"mimeTypes\": [\n \"\",\n \"\"\n ],\n \"observationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationUnitDbIds\": [\n \"\",\n \"\"\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/images","description":"

Get filtered set of image meta data

\n

Implementation Notes

\n
    \n

  • 'imageURL' should be a complete URL decribing the location of the image. There is no BrAPI call for retireiving the image content, so it could be on a different path, or a different host.

    \n
    • \n

  • 'descriptiveOntologyTerm' can be thought of as Tags for the image. These could be simple descriptive words, or ontology references, or full ontology URI's.

    \n
    • \n
\n

See Search Services for additional implementation details.

\n","urlObject":{"path":["search","images"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[]}},"response":[{"id":"08bc7926-1dff-4971-bda4-04c6cd91575e","name":"Forbidden","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"descriptiveOntologyTerms\": [\n \"\",\n \"\"\n ],\n \"imageFileNames\": [\n \"\",\n \"\"\n ],\n \"imageFileSizeMax\": \"\",\n \"imageFileSizeMin\": \"\",\n \"imageHeightMax\": \"\",\n \"imageHeightMin\": \"\",\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n \"\",\n \"\"\n ],\n \"type\": \"\"\n },\n \"type\": \"\"\n },\n \"imageNames\": [\n \"\",\n \"\"\n ],\n \"imageTimeStampRangeEnd\": \"\",\n \"imageTimeStampRangeStart\": \"\",\n \"imageWidthMax\": \"\",\n \"imageWidthMin\": \"\",\n \"mimeTypes\": [\n \"\",\n \"\"\n ],\n \"observationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationUnitDbIds\": [\n \"\",\n \"\"\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/images"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"0eddd081-e569-46df-ab63-e233a99409bb","name":"Bad Request","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"descriptiveOntologyTerms\": [\n \"\",\n \"\"\n ],\n \"imageFileNames\": [\n \"\",\n \"\"\n ],\n \"imageFileSizeMax\": \"\",\n \"imageFileSizeMin\": \"\",\n \"imageHeightMax\": \"\",\n \"imageHeightMin\": \"\",\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n \"\",\n \"\"\n ],\n \"type\": \"\"\n },\n \"type\": \"\"\n },\n \"imageNames\": [\n \"\",\n \"\"\n ],\n \"imageTimeStampRangeEnd\": \"\",\n \"imageTimeStampRangeStart\": \"\",\n \"imageWidthMax\": \"\",\n \"imageWidthMin\": \"\",\n \"mimeTypes\": [\n \"\",\n \"\"\n ],\n \"observationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationUnitDbIds\": [\n \"\",\n \"\"\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/images"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"7e57d736-b3b7-4465-9294-83e9f5079105","name":"Unauthorized","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"descriptiveOntologyTerms\": [\n \"\",\n \"\"\n ],\n \"imageFileNames\": [\n \"\",\n \"\"\n ],\n \"imageFileSizeMax\": \"\",\n \"imageFileSizeMin\": \"\",\n \"imageHeightMax\": \"\",\n \"imageHeightMin\": \"\",\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n \"\",\n \"\"\n ],\n \"type\": \"\"\n },\n \"type\": \"\"\n },\n \"imageNames\": [\n \"\",\n \"\"\n ],\n \"imageTimeStampRangeEnd\": \"\",\n \"imageTimeStampRangeStart\": \"\",\n \"imageWidthMax\": \"\",\n \"imageWidthMin\": \"\",\n \"mimeTypes\": [\n \"\",\n \"\"\n ],\n \"observationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationUnitDbIds\": [\n \"\",\n \"\"\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/images"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"c4916854-79f2-4996-910e-298beef80976","name":"OK","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"descriptiveOntologyTerms\": [\n \"\",\n \"\"\n ],\n \"imageFileNames\": [\n \"\",\n \"\"\n ],\n \"imageFileSizeMax\": \"\",\n \"imageFileSizeMin\": \"\",\n \"imageHeightMax\": \"\",\n \"imageHeightMin\": \"\",\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n \"\",\n \"\"\n ],\n \"type\": \"\"\n },\n \"type\": \"\"\n },\n \"imageNames\": [\n \"\",\n \"\"\n ],\n \"imageTimeStampRangeEnd\": \"\",\n \"imageTimeStampRangeStart\": \"\",\n \"imageWidthMax\": \"\",\n \"imageWidthMin\": \"\",\n \"mimeTypes\": [\n \"\",\n \"\"\n ],\n \"observationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationUnitDbIds\": [\n \"\",\n \"\"\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/images"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"searchResultDbId\": \"551ae08c-4548-4bde-ad70-f23beb25e2ea\"\n }\n}"}],"_postman_id":"77843704-585a-456e-828c-00ec6377c355"},{"name":"Get the results of an Images search request","id":"2810809d-2e17-4ce4-aa18-af93fac07baa","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/search/images/:searchResultsDbId?page=&pageSize=","description":"

Get filtered set of image meta data

\n

Implementation Notes

\n
    \n

  • 'imageURL' should be a complete URL decribing the location of the image. There is no BrAPI call for retireiving the image content, so it could be on a different path, or a different host.

    \n
    • \n

  • 'descriptiveOntologyTerm' can be thought of as Tags for the image. These could be simple descriptive words, or ontology references, or full ontology URI's.

    \n
    • \n
\n","urlObject":{"path":["search","images",":searchResultsDbId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[{"description":{"content":"

Permanent unique identifier which references the search results

\n","type":"text/plain"},"type":"any","value":"","key":"searchResultsDbId"}]}},"response":[{"id":"22989266-5a1e-491b-9329-74cd7d479062","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/search/images/?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["search","images",""],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 2,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"additionalInfo\": {},\n \"copyright\": \"Copyright 2018\",\n \"description\": \"BrAPI Logo\",\n \"descriptiveOntologyTerms\": [\n \"brapi\",\n \"logo\"\n ],\n \"imageDbId\": \"img2\",\n \"imageFileName\": \"brapi-logo.svg\",\n \"imageFileSize\": 3676,\n \"imageHeight\": 56,\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n -110.11301,\n 50.010082\n ],\n \"type\": \"Point\"\n },\n \"type\": \"Feature\"\n },\n \"imageName\": \"brapiLogo\",\n \"imageTimeStamp\": \"2011-06-14T00:00:00.000Z\",\n \"imageURL\": \"https://brapi.org/assets/images/brapi-logo.svg\",\n \"imageWidth\": 258,\n \"mimeType\": \"image/svg\",\n \"observationDbIds\": [\n \"1\",\n \"2\"\n ],\n \"observationUnitDbId\": \"1\"\n },\n {\n \"additionalInfo\": {},\n \"copyright\": \"Copyright 2019\",\n \"description\": \"BrAPI Logo\",\n \"descriptiveOntologyTerms\": [\n \"brapi\",\n \"logo\"\n ],\n \"imageDbId\": \"ce15937e-093e-4624-8950-00dab3172e4c\",\n \"imageFileName\": \"brapi-logo.svg\",\n \"imageFileSize\": 3676,\n \"imageHeight\": 56,\n \"imageLocation\": {\n \"geometry\": {\n \"coordinates\": [\n -110.11301,\n 50.010082\n ],\n \"type\": \"Point\"\n },\n \"type\": \"Feature\"\n },\n \"imageName\": \"brapiLogo\",\n \"imageTimeStamp\": \"1969-12-31T00:00:00.000Z\",\n \"imageURL\": \"\",\n \"imageWidth\": 258,\n \"mimeType\": \"image/svg\",\n \"observationDbIds\": [\n \"1\",\n \"2\"\n ],\n \"observationUnitDbId\": \"11\"\n }\n ]\n }\n}"},{"id":"619597c9-d39b-4bd4-a248-8049d69c260b","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/search/images/?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["search","images",""],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"8369a8f9-d33f-4556-b8f4-6c28fd8e0e06","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/search/images/?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["search","images",""],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"922f6c2d-ccdc-4f1d-8cab-c3471442ee7b","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/search/images/?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["search","images",""],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"e6380a22-17e4-4fae-a8eb-98ae49f86c12","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/search/images/?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["search","images",""],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""}],"_postman_id":"2810809d-2e17-4ce4-aa18-af93fac07baa"}],"id":"755d96d3-8364-458c-95a8-7c0fb1edc523","_postman_id":"755d96d3-8364-458c-95a8-7c0fb1edc523","description":""},{"name":"markers","item":[{"name":"Submit a search request for Markers","id":"7801a547-eae9-40fc-8f70-5d41b97e395f","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"POST","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"includeSynonyms\": \"\",\n \"markerDbIds\": [\n \"\",\n \"\"\n ],\n \"markerNames\": [\n \"\",\n \"\"\n ],\n \"matchMethod\": \"\",\n \"name\": \"\",\n \"page\": \"\",\n \"pageSize\": \"\",\n \"type\": \"\",\n \"types\": [\n \"\",\n \"\"\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/markers","description":"

See Search Services for additional implementation details.\nOther service requests use the servers internal markerDbId. This service returns marker records that provide the markerDbId. For the requested name or synonym, returns an array (possibly empty) of marker records that match the search criteria. \nIf there is none, an empty array is returned. If there is one or more than one match, returns an array of all marker records that match the search criteria. '

\n","urlObject":{"path":["search","markers"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[]}},"response":[{"id":"32503931-5ecd-45e1-8026-aa2a6c7a4432","name":"Unauthorized","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"includeSynonyms\": \"\",\n \"markerDbIds\": [\n \"\",\n \"\"\n ],\n \"markerNames\": [\n \"\",\n \"\"\n ],\n \"matchMethod\": \"\",\n \"name\": \"\",\n \"page\": \"\",\n \"pageSize\": \"\",\n \"type\": \"\",\n \"types\": [\n \"\",\n \"\"\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/markers"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"47608848-8f03-442d-b8c4-bdc3df1dab2b","name":"Bad Request","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"includeSynonyms\": \"\",\n \"markerDbIds\": [\n \"\",\n \"\"\n ],\n \"markerNames\": [\n \"\",\n \"\"\n ],\n \"matchMethod\": \"\",\n \"name\": \"\",\n \"page\": \"\",\n \"pageSize\": \"\",\n \"type\": \"\",\n \"types\": [\n \"\",\n \"\"\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/markers"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"92950a86-5deb-417c-ace8-b77791055d63","name":"OK","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"includeSynonyms\": \"\",\n \"markerDbIds\": [\n \"\",\n \"\"\n ],\n \"markerNames\": [\n \"\",\n \"\"\n ],\n \"matchMethod\": \"\",\n \"name\": \"\",\n \"page\": \"\",\n \"pageSize\": \"\",\n \"type\": \"\",\n \"types\": [\n \"\",\n \"\"\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/markers"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"searchResultDbId\": \"551ae08c-4548-4bde-ad70-f23beb25e2ea\"\n }\n}"},{"id":"c1deee99-dcfd-4991-95a4-91999152cca9","name":"Forbidden","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"includeSynonyms\": \"\",\n \"markerDbIds\": [\n \"\",\n \"\"\n ],\n \"markerNames\": [\n \"\",\n \"\"\n ],\n \"matchMethod\": \"\",\n \"name\": \"\",\n \"page\": \"\",\n \"pageSize\": \"\",\n \"type\": \"\",\n \"types\": [\n \"\",\n \"\"\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/markers"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""}],"_postman_id":"7801a547-eae9-40fc-8f70-5d41b97e395f"},{"name":"Get the results of a Markers search request","id":"517cb48f-dabd-4b87-8f7d-97f6faef69b4","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/search/markers/:searchResultsDbId?page=&pageSize=","description":"

See Search Services for additional implementation details. Other service requests use the servers internal markerDbId. This service returns marker records that provide the markerDbId. For the requested name or synonym, returns an array (possibly empty) of marker records that match the search criteria. - If there is none, an empty array is returned. - If there is one or more than one match, returns an array of all marker records that match the search criteria. '

\n","urlObject":{"path":["search","markers",":searchResultsDbId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[{"description":{"content":"

Permanent unique identifier which references the search results

\n","type":"text/plain"},"type":"any","value":"","key":"searchResultsDbId"}]}},"response":[{"id":"00fdbeea-7a09-471b-93c7-1a973dac6ea9","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/search/markers/?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["search","markers",""],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 2,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"analysisMethods\": [\n \"illumina\"\n ],\n \"defaultDisplayName\": \"marker1-1\",\n \"markerDbId\": \"mr01\",\n \"markerName\": \"marker1-1\",\n \"refAlt\": [\n \"A\",\n \"T\"\n ],\n \"synonyms\": [\n \"i_11_10010\"\n ],\n \"type\": \"marker\"\n },\n {\n \"analysisMethods\": [\n \"kasp\"\n ],\n \"defaultDisplayName\": \"marker1-2\",\n \"markerDbId\": \"mr02\",\n \"markerName\": \"marker1-2\",\n \"refAlt\": [\n \"A\",\n \"T\"\n ],\n \"synonyms\": [\n \"i_11_10020\"\n ],\n \"type\": \"marker\"\n }\n ]\n }\n}"},{"id":"660d1dea-9602-41c9-abc0-b80753a8bce2","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - 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2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"f0b004b3-0ed1-4be7-bde7-3d81111b6b90","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/search/markers/?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["search","markers",""],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"f52be44a-3546-4522-9491-ce10125de53a","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - 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HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

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Returns a list of observationUnit with the observed Phenotypes.

\n

observationTimeStamp - Iso Standard 8601.

\n

observationValue data type inferred from the ontology

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2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"170b1f21-5b78-4385-8605-081c09389aa8","name":"Unauthorized","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"germplasmDbIds\": [\n \"\",\n \"\"\n ],\n \"locationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationLevel\": \"\",\n \"observationTimeStampRangeEnd\": \"\",\n \"observationTimeStampRangeStart\": \"\",\n \"observationVariableDbIds\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\",\n \"programDbIds\": [\n \"\",\n \"\"\n ],\n \"seasonDbIds\": [\n \"\",\n \"\"\n ],\n \"studyDbIds\": [\n \"\",\n \"\"\n ],\n \"trialDbIds\": [\n \"\",\n \"\"\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/observationtables"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 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The requested content type which should be returned by the server

\n"},{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/search/observationtables/:searchResultsDbId?page=&pageSize=","description":"

Returns a list of observationUnit with the observed Phenotypes.

\n

observationTimeStamp - Iso Standard 8601.

\n

observationValue data type inferred from the ontology

\n","urlObject":{"path":["search","observationtables",":searchResultsDbId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[{"description":{"content":"

Permanent unique identifier which references the search results

\n","type":"text/plain"},"type":"any","value":"","key":"searchResultsDbId"}]}},"response":[{"id":"1b166073-b364-4b7a-801b-64b2701bd398","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"The requested content type which should be returned by the server","type":"text/plain"},"key":"Accept","value":"\"\""},{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/search/observationtables/?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["search","observationtables",""],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 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2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"fec83a10-a4cf-4f42-a57d-6ea8f878b7f6","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"The requested content type which should be returned by the server","type":"text/plain"},"key":"Accept","value":"\"\""},{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/search/observationtables/?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["search","observationtables",""],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 2,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n [\n \"2013\",\n \"1001\",\n \"Study 1\",\n \"1\",\n \"Location 1\",\n \"1\",\n \"Name001\",\n \"1\",\n \"1\",\n \"0\",\n \"1\",\n \"TEST\",\n \"1\",\n \"1\",\n \"1.2\",\n \"4.5\",\n \"\",\n \"\"\n ],\n [\n \"2011\",\n \"1003\",\n \"Study 3\",\n \"2\",\n \"Location 2\",\n \"4\",\n \"Name004\",\n \"10\",\n \"5\",\n \"1\",\n \"101\",\n \"FILLER\",\n \"1\",\n \"1\",\n \"100\",\n \"\",\n \"9\",\n \"2\"\n ]\n ],\n \"headerRow\": [\n \"year\",\n \"studyDbId\",\n \"studyName\",\n \"locationDbId\",\n \"locationName\",\n \"germplasmDbId\",\n \"germplasmName\",\n \"observationUnitDbId\",\n \"plotNumber\",\n \"replicate\",\n \"blockNumber\",\n \"entryType\",\n \"X\",\n \"Y\"\n ],\n \"observationVariableDbIds\": [\n \"MO_123:100002\",\n \"MO_123:100006\",\n \"MO_123:100003\",\n \"MO_123:100004\"\n ],\n \"observationVariableNames\": [\n \"Plant height\",\n \"Virus severity\",\n \"Carotenoid\",\n \"Root weight\"\n ]\n }\n}"}],"_postman_id":"4f2b3fc2-de0e-4a9a-8630-b00d08c3806f"}],"id":"145d0d70-5df5-467c-b34e-adf36b6dee99","_postman_id":"145d0d70-5df5-467c-b34e-adf36b6dee99","description":""},{"name":"observationunits","item":[{"name":"Submit a search request for Observation Units","id":"6fab9a0d-9358-4ea1-a7fb-04f275555a87","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"POST","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"germplasmDbIds\": [\n \"\",\n \"\"\n ],\n \"locationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationLevel\": \"\",\n \"observationTimeStampRangeEnd\": \"\",\n \"observationTimeStampRangeStart\": \"\",\n \"observationVariableDbIds\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\",\n \"programDbIds\": [\n \"\",\n \"\"\n ],\n \"seasonDbIds\": [\n \"\",\n \"\"\n ],\n \"studyDbIds\": [\n \"\",\n \"\"\n ],\n \"trialDbIds\": [\n \"\",\n \"\"\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/observationunits","description":"

Returns a list of observationUnit with the observed Phenotypes.

\n

See Search Services for additional implementation details.

\n

Use case - this section allows to get a dataset from multiple studies. It allows to integrate data from several databases.

\n

Refactor note - This call allows to get and integrate portions of multiple phenotyping data matrixes. A proposed evolution allowed to get a list of single observations, this functionality is still possible with this call by specifybing the observation variable, see below.

\n

Example Use cases

\n
    \n

  • Study a panel of germplasm accross multiple studies

    \n

    '{\"germplasmDbIds\": [\"Syrah\", \"34Mtp362\"]}'

    \n
    • \n

  • Get all data for a specific study (same as \"/studies/{studyDbId}/observationunits\")

    \n

    '{\"studyDbIds\" : [\"383\"]}'

    \n
    • \n

  • Get simple atomic phenotyping values

    \n

    '{

    \n
     \"germplasmDbIds\" : [ \"Syrah\", \"34Mtp362\" ], \n\n \"observationVariableDbIds\" : [ \"CO_345:0000043\"]\n

    }'

    \n
    • \n

  • Study Locations for adaptation to climate change

    \n

    '{

    \n
     \"locationDbIds\" : [\"383838\", \"MONTPELLIER\"], \n\n \"germplasmDbIds\" : [ \"14Mtp361\", \"24Mtp362\", \"34Mtp363\", \"44Mtp364\"]\n

    }'

    \n
    • \n

  • Find phenotypes that are from after a certain timestamp

    \n

    '{

    \n
     \"observationTimeStampRangeStart\" : \"2013-06-14T23:59:59-04:00\", \n\n \"observationTimeStampRangeEnd\" : \"2013-06-15T23:59:59-04:00\"\n

    }'

    \n
    • \n
\n

observationTimeStampRangeStart and observationTimeStampRangeEnd use Iso Standard 8601.

\n

observationValue data type inferred from the ontology

\n","urlObject":{"path":["search","observationunits"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[]}},"response":[{"id":"42bd4ede-16d2-4601-af43-ab8839ffa907","name":"Bad Request","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"germplasmDbIds\": [\n \"\",\n \"\"\n ],\n \"locationDbIds\": [\n \"\",\n \"\"\n ],\n \"observationLevel\": \"\",\n \"observationTimeStampRangeEnd\": \"\",\n \"observationTimeStampRangeStart\": \"\",\n \"observationVariableDbIds\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\",\n \"programDbIds\": [\n \"\",\n \"\"\n ],\n \"seasonDbIds\": [\n \"\",\n \"\"\n ],\n \"studyDbIds\": [\n \"\",\n \"\"\n ],\n \"trialDbIds\": [\n \"\",\n \"\"\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/observationunits"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 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HTTP HEADER - Token used for Authorization

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Bearer {token_string}

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HTTP HEADER - Token used for Authorization

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Bearer {token_string}

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2018-10-08T20:15:11Z - The requested object DbId is not found\""}],"_postman_id":"12b288cb-98c8-4a83-9a2b-1b6d8d9b028f"}],"id":"669ec5f9-39a2-4f03-8a6d-db0d5d6c6247","_postman_id":"669ec5f9-39a2-4f03-8a6d-db0d5d6c6247","description":""},{"name":"studies","item":[{"name":"Submit a search request for Studies","id":"dd050875-fb7a-4f40-87ad-18d3fe78698e","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"POST","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

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HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/search/studies/:searchResultsDbId?page=&pageSize=","description":"

Get list of studies

\n

StartDate and endDate should be ISO8601 format for dates

\n

See Search Services for additional implementation details.

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Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

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The size of the pages to be returned. Default is 1000.

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Permanent unique identifier which references the search results

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HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

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Search observation variables.

\n

See Search Services for additional implementation details.

\n","urlObject":{"path":["search","variables"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[]}},"response":[{"id":"0288f65b-5773-454c-abcb-f38658659a65","name":"OK","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"dataTypes\": [\n \"\",\n \"\"\n ],\n \"methodDbIds\": [\n \"\",\n \"\"\n ],\n \"observationVariableDbIds\": [\n \"\",\n \"\"\n ],\n \"observationVariableNames\": [\n \"\",\n \"\"\n ],\n \"observationVariableXrefs\": [\n \"\",\n \"\"\n ],\n \"ontologyDbIds\": [\n \"\",\n \"\"\n ],\n \"page\": \"\",\n \"pageSize\": \"\",\n \"scaleDbIds\": [\n \"\",\n \"\"\n ],\n \"scaleXrefs\": [\n \"\",\n \"\"\n ],\n \"traitClasses\": [\n \"\",\n \"\"\n ],\n \"traitDbIds\": [\n \"\",\n \"\"\n ],\n \"traitXrefs\": [\n \"\",\n \"\"\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/search/variables"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"searchResultDbId\": \"551ae08c-4548-4bde-ad70-f23beb25e2ea\"\n }\n}"},{"id":"39012445-e044-46df-9eb9-f3159174826a","name":"Bad Request","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - 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HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/search/variables/:searchResultsDbId?page=&pageSize=","description":"

Search observation variables.

\n

See Search Services for additional implementation details.

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Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

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The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[{"description":{"content":"

Permanent unique identifier which references the search results

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\"https://ontology.org/t1\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"status\": \"active\",\n \"synonyms\": [],\n \"traitDbId\": \"t1\",\n \"traitName\": \"Plant Height\",\n \"xref\": \"xref\"\n },\n \"xref\": \"MO_123:100002\"\n },\n {\n \"contextOfUse\": [],\n \"crop\": \"maize\",\n \"date\": \"2018-12-05T00:00:00.000Z\",\n \"defaultValue\": \"10\",\n \"documentationURL\": \"https://brapi.org\",\n \"growthStage\": \"1\",\n \"institution\": \"1\",\n \"language\": \"English\",\n \"method\": {\n \"class\": \"Categorical\",\n \"description\": \"Comparing sample color to standard color palette\",\n \"formula\": \"NA\",\n \"methodDbId\": \"m3\",\n \"methodName\": \"Standard Color Palette\",\n \"name\": \"Standard Color Palette\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"https://ontology.org/m3\",\n \"type\": \"OBO\",\n \"url\": \"https://ontology.org/m3\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"reference\": \"google.com\"\n },\n \"name\": \"Carotenoid\",\n \"observationVariableDbId\": \"MO_123:100003\",\n \"observationVariableName\": \"Carotenoid\",\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"https://ontology.org\",\n \"type\": \"WEBPAGE\",\n \"url\": \"https://ontology.org\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"scale\": {\n \"dataType\": \"Nominal\",\n \"decimalPlaces\": 0,\n \"name\": \"Color\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"https://ontology.org/s3\",\n \"type\": \"WEBPAGE\",\n \"url\": \"https://ontology.org/s3\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"scaleDbId\": \"s3\",\n \"scaleName\": \"Color\",\n 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HTTP HEADER - Token used for Authorization

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Bearer {token_string}

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DEPRECATED in v1.3 - see GET /studies/{studyDbId}/layouts (pluralized)

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Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

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The size of the pages to be returned. Default is 1000.

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Identifier of the study. Usually a number, could be alphanumeric.

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HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

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DEPRECATED in v1.3 - see PUT /studies/{studyDbId}/layouts (pluralized)

\n","urlObject":{"path":["studies",":studyDbId","layout"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

Identifier of the study. Usually a number, could be alphanumeric.

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2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"6aecbdc1-5101-4690-b830-be7b3f800743","name":"Forbidden","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"layout\": [\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n },\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n }\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies//layout"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 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2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"c4b900f3-b14b-47a2-ac7e-f45228672535","name":"OK","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"layout\": [\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n },\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n }\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies//layout"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"X\": \"1\",\n \"Y\": \"1\",\n \"additionalInfo\": {},\n \"blockNumber\": \"0\",\n \"entryType\": \"CHECK\",\n \"germplasmDbId\": \"2\",\n \"germplasmName\": \"Name002\",\n \"observationLevel\": \"plot\",\n \"observationUnitDbId\": \"11\",\n \"observationUnitName\": \"Plot 6\",\n \"replicate\": \"0\",\n \"studyDbId\": \"1003\"\n }\n ]\n }\n}"},{"id":"cb6ed4b5-dce8-4da8-8ed9-1cfe1c0dd0d3","name":"Unauthorized","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"layout\": [\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n },\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n }\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies//layout"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""}],"_postman_id":"737b0358-9240-4eb7-b8b5-504d27abe4ad"}],"id":"127cc358-7a2e-40ec-8d0e-3e7520ce511a","_postman_id":"127cc358-7a2e-40ec-8d0e-3e7520ce511a","description":""},{"name":"layouts","item":[{"name":"Get the plot layout details for a specific Study","id":"39bf9d1b-233a-4c44-b2d0-2793d4b25a70","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/studies/:studyDbId/layouts?page=&pageSize=","description":"

Retrive the layout details for a study. Returns an array of observation unit position data which describes where each unit and germplasm is located within the study layout

\n

Retrieve the plot layout of the study with id {id}.

\n

For each observationUnit within a study, return the block, replicate, and entryType values as well as the X and Y coordinates. entryType can be \"check\", \"test\", or \"filler\".

\n

Also return some human readable meta data about the observationUnit and germplasm.

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Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

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The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[{"description":{"content":"

Identifier of the study. Usually a number, could be alphanumeric.

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2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"d3a26351-8e2a-4820-aff0-8b3b013cf3ce","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/studies//layouts?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["studies","","layouts"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"f44bdd87-2d7b-4bcd-ad14-5c0223030226","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/studies//layouts?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["studies","","layouts"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""}],"_postman_id":"39bf9d1b-233a-4c44-b2d0-2793d4b25a70"},{"name":"Update an existing Study with new layout details","id":"e720330b-189d-43e7-a8e6-9a2b867d5ffa","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"PUT","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"layout\": [\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n },\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n }\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies/:studyDbId/layouts","description":"

Modify a study layout

\n

Update the layout data for a set of observation units within a study. Each layout object is a subset of fields within an observationUnit, so it doesnt make sense to create a new layout object by itself.

\n

Implementation Notes:

\n
    \n

  • If any of the fields in the request object is missing, that piece of data will not be updated.

    \n
    • \n

  • If an observationUnitDbId can not be found within the given study, an error will be returned.

    \n
    • \n

  • entryType can have the values \"check\", \"test\", or \"filler\".

    \n
    • \n

  • The response should match the structure of the response from GET studies/{studyDbId}/layout, but it should only contain the layout objects which have been updated by the PUT request. Also, pagination is not available in the response.

    \n
    • \n
\n","urlObject":{"path":["studies",":studyDbId","layouts"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

Identifier of the study. Usually a number, could be alphanumeric.

\n","type":"text/plain"},"type":"any","value":"","key":"studyDbId"}]}},"response":[{"id":"51322497-1548-412f-8206-6bba2ec42bdc","name":"Not Found","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"layout\": [\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n },\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n }\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies//layouts"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"683f7728-6d24-4291-b1e1-7a329b221d2e","name":"Unauthorized","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"layout\": [\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n },\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n }\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies//layouts"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"a77fd511-7cb5-4b39-af30-53cb394d700d","name":"Forbidden","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"layout\": [\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n },\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n }\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies//layouts"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"bc122f5e-8c05-4cb2-ba86-6a524e342083","name":"Bad Request","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"layout\": [\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n },\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n }\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies//layouts"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"cf7114fb-5a62-4e5d-92a4-ef1a218edc3f","name":"OK","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"layout\": [\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n },\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryType\": \"\",\n \"observationUnitDbId\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\"\n }\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies//layouts"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"X\": \"1\",\n \"Y\": \"1\",\n \"additionalInfo\": {},\n \"blockNumber\": \"0\",\n \"entryType\": \"CHECK\",\n \"germplasmDbId\": \"2\",\n \"germplasmName\": \"Name002\",\n \"observationLevel\": \"plot\",\n \"observationUnitDbId\": \"11\",\n \"observationUnitName\": \"Plot 6\",\n \"replicate\": \"0\",\n \"studyDbId\": \"1003\"\n }\n ]\n }\n}"}],"_postman_id":"e720330b-189d-43e7-a8e6-9a2b867d5ffa"}],"id":"69100d88-133d-48a3-b95e-39642feb4dbe","_postman_id":"69100d88-133d-48a3-b95e-39642feb4dbe","description":""},{"name":"observations","item":[{"name":"Get the Observations associated with a specific Study","id":"bdad668c-91be-4a3e-89b2-ae39bb54d2cd","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/studies/:studyDbId/observations?observationVariableDbIds=&observationVariableDbIds=&page=&pageSize=","description":"

Retrieve all observations where there are measurements for the given observation variables.

\n

observationTimestamp should be ISO8601 format with timezone -> YYYY-MM-DDThh:mm:ss+hhmm

\n","urlObject":{"path":["studies",":studyDbId","observations"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Numeric id of that variable (combination of trait, unit and method)

\n","type":"text/plain"},"key":"observationVariableDbIds","value":""},{"description":{"content":"

Numeric id of that variable (combination of trait, unit and method)

\n","type":"text/plain"},"key":"observationVariableDbIds","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[{"description":{"content":"

Identifier of the study. Usually a number, could be alphanumeric.

\n","type":"text/plain"},"type":"any","value":"","key":"studyDbId"}]}},"response":[{"id":"0780713c-9029-4c4b-acba-b24da277346b","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/studies//observations?observationVariableDbIds=&observationVariableDbIds=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["studies","","observations"],"query":[{"key":"observationVariableDbIds","value":""},{"key":"observationVariableDbIds","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"264763dc-d22a-46a7-b4ca-74cfa6e31942","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/studies//observations?observationVariableDbIds=&observationVariableDbIds=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["studies","","observations"],"query":[{"key":"observationVariableDbIds","value":""},{"key":"observationVariableDbIds","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"4fd33497-dca6-4510-8242-0f5580a019c7","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/studies//observations?observationVariableDbIds=&observationVariableDbIds=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["studies","","observations"],"query":[{"key":"observationVariableDbIds","value":""},{"key":"observationVariableDbIds","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"78525504-5c8e-4f72-8855-b7627f1eaf33","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/studies//observations?observationVariableDbIds=&observationVariableDbIds=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["studies","","observations"],"query":[{"key":"observationVariableDbIds","value":""},{"key":"observationVariableDbIds","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 9,\n \"totalPages\": 5\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"germplasmDbId\": \"1\",\n \"germplasmName\": \"Name001\",\n \"observationDbId\": \"1\",\n \"observationLevel\": \"plot\",\n \"observationTimeStamp\": \"2013-06-15T02:03:51.000Z\",\n \"observationUnitDbId\": \"1\",\n \"observationUnitName\": \"Plot 1\",\n \"observationVariableDbId\": \"MO_123:100002\",\n \"observationVariableName\": \"Plant height\",\n \"operator\": \"Bob\",\n \"season\": {\n \"season\": \"fall\",\n \"seasonDbId\": \"1\",\n \"year\": \"2011\"\n },\n \"studyDbId\": \"1001\",\n \"uploadedBy\": \"Bob\",\n \"value\": \"1.2\"\n },\n {\n \"germplasmDbId\": \"1\",\n \"germplasmName\": \"Name001\",\n \"observationDbId\": \"2\",\n \"observationLevel\": \"plot\",\n \"observationTimeStamp\": \"2013-06-15T02:04:51.000Z\",\n \"observationUnitDbId\": \"1\",\n \"observationUnitName\": \"Plot 1\",\n \"observationVariableDbId\": \"MO_123:100006\",\n \"observationVariableName\": \"Virus severity\",\n \"operator\": \"Bob\",\n \"season\": {\n \"season\": \"fall\",\n \"seasonDbId\": \"1\",\n \"year\": \"2011\"\n },\n \"studyDbId\": \"1001\",\n \"uploadedBy\": \"Bob\",\n \"value\": \"4.5\"\n }\n ]\n }\n}"},{"id":"c4167fca-b79c-4482-965a-5afb5c31f3f9","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/studies//observations?observationVariableDbIds=&observationVariableDbIds=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["studies","","observations"],"query":[{"key":"observationVariableDbIds","value":""},{"key":"observationVariableDbIds","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""}],"_postman_id":"bdad668c-91be-4a3e-89b2-ae39bb54d2cd"},{"name":"Update the Observations of a specific Study","id":"34ccfe21-2dfe-47f9-960f-35daad111923","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"PUT","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationDbId\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationVariableDbId\": \"\",\n \"value\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationDbId\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationVariableDbId\": \"\",\n \"value\": \"\"\n }\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies/:studyDbId/observations","description":"

Implementation Guidelines:

\n
    \n

  • If an observationDbId is \"null\" or an empty string in the request, a NEW observation should be created for the given study and observationUnit

    \n
    • \n

  • If an observationDbId is populated but not found in the database, a NEW observation should be created for the given study and observationUnit AND an NEW observationDbId should be assigned to it. A warning should be returned to the client.

    \n
    • \n

  • If an observationDbId is populated and found in the database, but the existing entry is not associated with the given study or observationUnit, a NEW observation should be created for the given study and observationUnit AND an NEW observationDbId should be assigned to it. A warning should be returned to the client.

    \n
    • \n

  • If an observationDbId is populated and found in the database and is associated with the given study and observationUnit, then it should be updated with the new data given.

    \n
    • \n
\n","urlObject":{"path":["studies",":studyDbId","observations"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

Identifier of the study. Usually a number, could be alphanumeric.

\n","type":"text/plain"},"type":"any","value":"","key":"studyDbId"}]}},"response":[{"id":"7403d9ec-8cde-411d-b6eb-a3988c22f21b","name":"OK","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationDbId\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationVariableDbId\": \"\",\n \"value\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationDbId\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationVariableDbId\": \"\",\n \"value\": \"\"\n }\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies//observations"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"observations\": [\n {\n \"observationDbId\": \"19\",\n \"observationUnitDbId\": \"11\",\n \"observationVariableDbId\": \"MO_123:100002\"\n },\n {\n \"observationDbId\": \"20\",\n \"observationUnitDbId\": \"11\",\n \"observationVariableDbId\": \"MO_123:100003\"\n },\n {\n \"observationDbId\": \"21\",\n \"observationUnitDbId\": \"11\",\n \"observationVariableDbId\": \"MO_123:100005\"\n },\n {\n \"observationDbId\": \"22\",\n \"observationUnitDbId\": \"11\",\n \"observationVariableDbId\": \"MO_123:100004\"\n },\n {\n \"observationDbId\": \"1f55443e-c7e1-4b71-bc9c-02ddbca9ab7d\",\n \"observationUnitDbId\": \"11\",\n \"observationVariableDbId\": \"MO_123:100002\"\n }\n ]\n }\n}"},{"id":"76074def-9432-4424-98d3-ceaa6c132ae4","name":"Bad Request","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationDbId\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationVariableDbId\": \"\",\n \"value\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationDbId\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationVariableDbId\": \"\",\n \"value\": \"\"\n }\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies//observations"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"80e0c539-cb14-404e-8438-ff87c51eb74f","name":"Unauthorized","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationDbId\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationVariableDbId\": \"\",\n \"value\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationDbId\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationVariableDbId\": \"\",\n \"value\": \"\"\n }\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies//observations"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"a795b6ed-199c-4e98-86e6-ea6a8b5017c3","name":"Not Found","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationDbId\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationVariableDbId\": \"\",\n \"value\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationDbId\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationVariableDbId\": \"\",\n \"value\": \"\"\n }\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies//observations"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"cd537aa7-e4cc-412b-b658-17e191020d63","name":"Forbidden","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationDbId\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationVariableDbId\": \"\",\n \"value\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationDbId\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationVariableDbId\": \"\",\n \"value\": \"\"\n }\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies//observations"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""}],"_postman_id":"34ccfe21-2dfe-47f9-960f-35daad111923"}],"id":"e3e129cd-7207-4ce9-b746-4fcb45fa0f09","_postman_id":"e3e129cd-7207-4ce9-b746-4fcb45fa0f09","description":""},{"name":"observationunits","item":[{"name":"Get the Observation Units associated with a specific Study","id":"f89ca61b-79c1-4a50-8f11-54054554ffc1","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/studies/:studyDbId/observationunits?observationLevel=&page=&pageSize=","description":"

The main API call for field data collection, to retrieve all the observation units within a study.

\n","urlObject":{"path":["studies",":studyDbId","observationunits"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

The granularity level of observation units. Either plotNumber or plantNumber fields will be relavant depending on whether granularity is plot or plant respectively.

\n","type":"text/plain"},"key":"observationLevel","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[{"description":{"content":"

The study these observation units are related to.

\n","type":"text/plain"},"type":"any","value":"","key":"studyDbId"}]}},"response":[{"id":"101f0e2c-0d3a-4ab9-9a24-f58283de5b30","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/studies//observationunits?observationLevel=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["studies","","observationunits"],"query":[{"key":"observationLevel","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"1413c160-cc3c-421a-8b4b-fbfd2bc71391","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/studies//observationunits?observationLevel=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["studies","","observationunits"],"query":[{"key":"observationLevel","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"45c54be8-b107-4ef7-8f07-d2b8e3ce9bd5","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/studies//observationunits?observationLevel=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["studies","","observationunits"],"query":[{"key":"observationLevel","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"6cb964f0-3143-4ff7-a9e6-4673041a0d11","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/studies//observationunits?observationLevel=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["studies","","observationunits"],"query":[{"key":"observationLevel","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"abc2cc3b-74a9-4f54-bfb8-27121ca9dc32","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/studies//observationunits?observationLevel=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["studies","","observationunits"],"query":[{"key":"observationLevel","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 4,\n \"totalPages\": 2\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"X\": \"1\",\n \"Y\": \"1\",\n \"blockNumber\": \"1\",\n \"entryNumber\": \"1\",\n \"entryType\": \"TEST\",\n \"germplasmDbId\": \"1\",\n \"germplasmName\": \"Name001\",\n \"observationUnitDbId\": \"1\",\n \"observationUnitName\": \"Plot 1\",\n \"observationUnitXref\": [\n {\n \"id\": \"SAMEA179865230\",\n \"source\": \"ebi.biosample\"\n },\n {\n \"id\": \"INRA:CoeSt6 _SMH03\",\n \"source\": \"gnpis.lot\"\n },\n {\n \"id\": \"239865\",\n \"source\": \"kernelDB\"\n }\n ],\n \"observations\": [\n {\n \"collector\": \"A. Technician\",\n \"observationDbId\": \"1\",\n \"observationTimeStamp\": \"2013-06-15T02:03:51.000Z\",\n \"observationVariableDbId\": \"MO_123:100002\",\n \"observationVariableName\": \"Plant height\",\n \"season\": {\n \"season\": \"fall\",\n \"seasonDbId\": \"1\",\n \"year\": \"2011\"\n },\n \"value\": \"1.2\"\n },\n {\n \"collector\": \"A. Technician\",\n \"observationDbId\": \"2\",\n \"observationTimeStamp\": \"2013-06-15T02:04:51.000Z\",\n \"observationVariableDbId\": \"MO_123:100006\",\n \"observationVariableName\": \"Virus severity\",\n \"season\": {\n \"season\": \"fall\",\n \"seasonDbId\": \"1\",\n \"year\": \"2011\"\n },\n \"value\": \"4.5\"\n },\n {\n \"collector\": \"string\",\n \"observationDbId\": \"bb989815-86bf-430b-9d87-054df8919767\",\n \"observationTimeStamp\": \"1970-01-18T19:02:52.000Z\",\n \"observationVariableDbId\": \"MO_123:100002\",\n \"observationVariableName\": \"Plant height\",\n \"season\": {\n \"season\": \"fall\",\n \"seasonDbId\": \"1\",\n \"year\": \"2011\"\n },\n \"value\": \"string\"\n }\n ],\n \"pedigree\": \"A000001/A000002\",\n \"plantNumber\": \"0\",\n \"plotNumber\": \"1\",\n \"replicate\": \"0\"\n },\n {\n \"X\": \"1\",\n \"Y\": \"1\",\n \"blockNumber\": \"1\",\n \"entryNumber\": \"2\",\n \"entryType\": \"TEST\",\n \"germplasmDbId\": \"1\",\n \"germplasmName\": \"Name001\",\n \"observationUnitDbId\": \"2\",\n \"observationUnitName\": \"Plant 1\",\n \"observationUnitXref\": [\n {\n \"id\": \"SAMEA179865815\",\n \"source\": \"ebi.biosample\"\n },\n {\n \"id\": \"INRA:CoeSt6 _SMH13\",\n \"source\": \"gnpis.lot\"\n },\n {\n \"id\": \"239167\",\n \"source\": \"kernelDB\"\n }\n ],\n \"observations\": [\n {\n \"collector\": \"A. Technician\",\n \"observationDbId\": \"3\",\n \"observationTimeStamp\": \"2013-06-15T02:05:51.000Z\",\n \"observationVariableDbId\": \"MO_123:100002\",\n \"observationVariableName\": \"Plant height\",\n \"season\": {\n \"season\": \"fall\",\n \"seasonDbId\": \"1\",\n \"year\": \"2011\"\n },\n \"value\": \"1.1\"\n },\n {\n \"collector\": \"A. Technician\",\n \"observationDbId\": \"4\",\n \"observationTimeStamp\": \"2013-06-15T02:06:51.000Z\",\n \"observationVariableDbId\": \"MO_123:100006\",\n \"observationVariableName\": \"Virus severity\",\n \"season\": {\n \"season\": \"fall\",\n \"seasonDbId\": \"1\",\n \"year\": \"2011\"\n },\n \"value\": \"5.1\"\n }\n ],\n \"pedigree\": \"A000001/A000002\",\n \"plantNumber\": \"1\",\n \"plotNumber\": \"1\",\n \"replicate\": \"0\"\n }\n ]\n }\n}"}],"_postman_id":"f89ca61b-79c1-4a50-8f11-54054554ffc1"},{"name":"Update the Observation Units for a specific Study","id":"a9ec2f2f-a52e-483d-809e-6250c3f9aba9","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"PUT","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"[\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryNumber\": \"\",\n \"entryType\": \"\",\n \"germplasmDbId\": \"\",\n \"observationLevel\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationUnitName\": \"\",\n \"observationUnitXref\": [\n {\n \"id\": \"\",\n \"source\": \"\"\n },\n {\n \"id\": \"\",\n \"source\": \"\"\n }\n ],\n \"observations\": [\n {\n \"germplasmDbId\": \"\",\n \"germplasmName\": \"\",\n \"observationDbId\": \"\",\n \"observationLevel\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationUnitName\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"operator\": \"\",\n \"season\": {\n \"season\": \"\",\n \"seasonDbId\": \"\",\n \"year\": \"\"\n },\n \"studyDbId\": \"\",\n \"uploadedBy\": \"\",\n \"value\": \"\"\n },\n {\n \"germplasmDbId\": \"\",\n \"germplasmName\": \"\",\n \"observationDbId\": \"\",\n \"observationLevel\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationUnitName\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"operator\": \"\",\n \"season\": {\n \"season\": \"\",\n \"seasonDbId\": \"\",\n \"year\": \"\"\n },\n \"studyDbId\": \"\",\n \"uploadedBy\": \"\",\n \"value\": \"\"\n }\n ],\n \"plantNumber\": \"\",\n \"plotNumber\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\",\n \"studyDbId\": \"\",\n \"treatments\": [\n {\n \"factor\": \"\",\n \"modality\": \"\"\n },\n {\n \"factor\": \"\",\n \"modality\": \"\"\n }\n ]\n },\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryNumber\": \"\",\n \"entryType\": \"\",\n \"germplasmDbId\": \"\",\n \"observationLevel\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationUnitName\": \"\",\n \"observationUnitXref\": [\n {\n \"id\": \"\",\n \"source\": \"\"\n },\n {\n \"id\": \"\",\n \"source\": \"\"\n }\n ],\n \"observations\": [\n {\n \"germplasmDbId\": \"\",\n \"germplasmName\": \"\",\n \"observationDbId\": \"\",\n \"observationLevel\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationUnitName\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"operator\": \"\",\n \"season\": {\n \"season\": \"\",\n \"seasonDbId\": \"\",\n \"year\": \"\"\n },\n \"studyDbId\": \"\",\n \"uploadedBy\": \"\",\n \"value\": \"\"\n },\n {\n \"germplasmDbId\": \"\",\n \"germplasmName\": \"\",\n \"observationDbId\": \"\",\n \"observationLevel\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationUnitName\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"operator\": \"\",\n \"season\": {\n \"season\": \"\",\n \"seasonDbId\": \"\",\n \"year\": \"\"\n },\n \"studyDbId\": \"\",\n \"uploadedBy\": \"\",\n \"value\": \"\"\n }\n ],\n \"plantNumber\": \"\",\n \"plotNumber\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\",\n \"studyDbId\": \"\",\n \"treatments\": [\n {\n \"factor\": \"\",\n \"modality\": \"\"\n },\n {\n \"factor\": \"\",\n \"modality\": \"\"\n }\n ]\n }\n]"},"url":"https://test-server.brapi.org/brapi/v1/studies/:studyDbId/observationunits","description":"

Use this call for uploading new Observations as JSON to a system.

\n

Note: If ''observationUnitDbId'' or ''observationDbId'' is populated, they should be considered updates to existing records. \nIf an existing record of that DbId is not found, the document should be treated as new records and assigned new DbIds. \nIf ''observationUnitDbId'' or ''observationDbId'' is un-populated (empty string or null) the document should be treated as new records and assigned new DbIds.

\n","urlObject":{"path":["studies",":studyDbId","observationunits"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

The study these observation units are related to.

\n","type":"text/plain"},"type":"any","value":"","key":"studyDbId"}]}},"response":[{"id":"40c393e2-5354-4b32-ae48-aa44c62f8342","name":"Not Found","originalRequest":{"method":"PUT","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"[\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryNumber\": \"\",\n \"entryType\": \"\",\n \"germplasmDbId\": \"\",\n \"observationLevel\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationUnitName\": \"\",\n \"observationUnitXref\": [\n {\n \"id\": \"\",\n \"source\": \"\"\n },\n {\n \"id\": \"\",\n \"source\": \"\"\n }\n ],\n \"observations\": [\n {\n \"germplasmDbId\": \"\",\n \"germplasmName\": \"\",\n \"observationDbId\": \"\",\n \"observationLevel\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationUnitName\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"operator\": \"\",\n \"season\": {\n \"season\": \"\",\n \"seasonDbId\": \"\",\n \"year\": \"\"\n },\n \"studyDbId\": \"\",\n \"uploadedBy\": \"\",\n \"value\": \"\"\n },\n {\n \"germplasmDbId\": \"\",\n \"germplasmName\": \"\",\n \"observationDbId\": \"\",\n \"observationLevel\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationUnitName\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"operator\": \"\",\n \"season\": {\n \"season\": \"\",\n \"seasonDbId\": \"\",\n \"year\": \"\"\n },\n \"studyDbId\": \"\",\n \"uploadedBy\": \"\",\n \"value\": \"\"\n }\n ],\n \"plantNumber\": \"\",\n \"plotNumber\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\",\n \"studyDbId\": \"\",\n \"treatments\": [\n {\n \"factor\": \"\",\n \"modality\": \"\"\n },\n {\n \"factor\": \"\",\n \"modality\": \"\"\n }\n ]\n },\n {\n \"X\": \"\",\n \"Y\": \"\",\n \"blockNumber\": \"\",\n \"entryNumber\": \"\",\n \"entryType\": \"\",\n \"germplasmDbId\": \"\",\n \"observationLevel\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationUnitName\": \"\",\n \"observationUnitXref\": [\n {\n \"id\": \"\",\n \"source\": \"\"\n },\n {\n \"id\": \"\",\n \"source\": \"\"\n }\n ],\n \"observations\": [\n {\n \"germplasmDbId\": \"\",\n \"germplasmName\": \"\",\n \"observationDbId\": \"\",\n \"observationLevel\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationUnitName\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"operator\": \"\",\n \"season\": {\n \"season\": \"\",\n \"seasonDbId\": \"\",\n \"year\": \"\"\n },\n \"studyDbId\": \"\",\n \"uploadedBy\": \"\",\n \"value\": \"\"\n },\n {\n \"germplasmDbId\": \"\",\n \"germplasmName\": \"\",\n \"observationDbId\": \"\",\n \"observationLevel\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationUnitName\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"operator\": \"\",\n \"season\": {\n \"season\": \"\",\n \"seasonDbId\": \"\",\n \"year\": \"\"\n },\n \"studyDbId\": \"\",\n \"uploadedBy\": \"\",\n \"value\": \"\"\n }\n ],\n \"plantNumber\": \"\",\n \"plotNumber\": \"\",\n \"positionCoordinateX\": \"\",\n \"positionCoordinateXType\": \"\",\n \"positionCoordinateY\": \"\",\n \"positionCoordinateYType\": \"\",\n \"replicate\": \"\",\n \"studyDbId\": \"\",\n \"treatments\": [\n {\n \"factor\": \"\",\n \"modality\": \"\"\n },\n {\n \"factor\": \"\",\n \"modality\": \"\"\n }\n ]\n }\n]"},"url":"https://test-server.brapi.org/brapi/v1/studies//observationunits"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 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2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""}],"_postman_id":"a9ec2f2f-a52e-483d-809e-6250c3f9aba9"},{"name":"Deprecated Save Observation Unit Phenotypes","id":"3822e7b9-a487-4284-a416-5b519c78bfdd","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"POST","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"metadata\": {\n \"datafiles\": [\n \"\",\n \"\"\n ],\n \"pagination\": {\n \"currentPage\": \"\",\n \"pageSize\": \"\",\n \"totalCount\": \"\",\n \"totalPages\": \"\"\n },\n \"status\": [\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n },\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n }\n ]\n },\n \"result\": {\n \"commit\": \"\",\n \"data\": [\n {\n \"observatioUnitDbId\": \"\",\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationDbId\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationVariableDbId\": \"\",\n \"value\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationDbId\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationVariableDbId\": \"\",\n \"value\": \"\"\n }\n ],\n \"studyDbId\": \"\"\n },\n {\n \"observatioUnitDbId\": \"\",\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationDbId\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationVariableDbId\": \"\",\n \"value\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationDbId\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationUnitDbId\": \"\",\n \"observationVariableDbId\": \"\",\n \"value\": \"\"\n }\n ],\n \"studyDbId\": \"\"\n }\n ],\n \"transactionDbId\": \"\"\n }\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies/:studyDbId/observationunits?format=","description":"

This call has been deprecated in V1.1. Use instead: \"PUT /studies/{studyDbId}/observationunits\" and \"PUT /studies/{studyDbId}/observationunits/zip\"

\n","urlObject":{"path":["studies",":studyDbId","observationunits"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

(default is JSON, but can be zip) In case where JSON data is zipped for faster transfer speed (as in the case of the IRRI handheld implementation), the zipped JSON file will be listed in datafiles. The zipped file contains a JSON file with the same structure as the BrAPI call.

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The study these observation units are related to.

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\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"data\": [\n [\n \"\",\n \"\"\n ],\n [\n \"\",\n \"\"\n ]\n ],\n \"headerRow\": [\n \"\",\n \"\"\n ],\n \"metadata\": {\n \"datafiles\": [\n \"\",\n \"\"\n ],\n \"pagination\": {\n \"currentPage\": \"\",\n \"pageSize\": \"\",\n \"totalCount\": \"\",\n \"totalPages\": \"\"\n },\n \"status\": [\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n },\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n }\n ]\n },\n \"observationVariableDbIds\": [\n \"\",\n \"\"\n ],\n \"result\": {\n \"data\": [\n [\n \"\",\n \"\"\n ],\n [\n \"\",\n \"\"\n ]\n ]\n }\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies/:studyDbId/table","description":"

This call can be used to create new observations in bulk.

\n

Note: If you need to update any existing observation, please use PUT /studies/{studyDbId}/observations. This call should only be used to create NEW observations.

\n

Implementation Guidelines:

\n
    \n

  • All observations submitted through this call should create NEW observation records in the database under the given observation unit.

    \n
    • \n

  • Each \"observationUnitDbId\" listed should already exist in the database. If the server can not find a given \"observationUnitDbId\", it should report an error. (see Error Handling)

    \n
    • \n

  • The response of this call should be the set of \"observationDbIds\" created from this call, along with the associated \"observationUnitDbId\" and \"observationVariableDbId\" that each observation is associated with.

    \n
    • \n

  • Images can optionally be saved using this call by providing a zipped file of all images in the datafiles. The physical zipped file should be transferred as well in the mulit-part form data.

    \n
    • \n
\n","urlObject":{"path":["studies",":studyDbId","table"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

Identifier of the study. Usually a number, could be alphanumeric.

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2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"bcc653d0-ac0e-4fec-a65e-0a9efcc9a2c2","name":"Not Found","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"data\": [\n [\n \"\",\n \"\"\n ],\n [\n \"\",\n \"\"\n ]\n ],\n \"headerRow\": [\n \"\",\n \"\"\n ],\n \"metadata\": {\n \"datafiles\": [\n \"\",\n \"\"\n ],\n \"pagination\": {\n \"currentPage\": \"\",\n \"pageSize\": \"\",\n \"totalCount\": \"\",\n \"totalPages\": \"\"\n },\n \"status\": [\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n },\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n }\n ]\n },\n \"observationVariableDbIds\": [\n \"\",\n \"\"\n ],\n \"result\": {\n \"data\": [\n [\n \"\",\n \"\"\n ],\n [\n \"\",\n \"\"\n ]\n ]\n }\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies//table"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"d2098739-5b52-4425-9f00-fefba4b7dac8","name":"Forbidden","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"data\": [\n [\n \"\",\n \"\"\n ],\n [\n \"\",\n \"\"\n ]\n ],\n \"headerRow\": [\n \"\",\n \"\"\n ],\n \"metadata\": {\n \"datafiles\": [\n \"\",\n \"\"\n ],\n \"pagination\": {\n \"currentPage\": \"\",\n \"pageSize\": \"\",\n \"totalCount\": \"\",\n \"totalPages\": \"\"\n },\n \"status\": [\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n },\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n }\n ]\n },\n \"observationVariableDbIds\": [\n \"\",\n \"\"\n ],\n \"result\": {\n \"data\": [\n [\n \"\",\n \"\"\n ],\n [\n \"\",\n \"\"\n ]\n ]\n }\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies//table"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"e7bc0751-45fd-4664-b2ee-a25a8d217771","name":"OK","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"data\": [\n [\n \"\",\n \"\"\n ],\n [\n \"\",\n \"\"\n ]\n ],\n \"headerRow\": [\n \"\",\n \"\"\n ],\n \"metadata\": {\n \"datafiles\": [\n \"\",\n \"\"\n ],\n \"pagination\": {\n \"currentPage\": \"\",\n \"pageSize\": \"\",\n \"totalCount\": \"\",\n \"totalPages\": \"\"\n },\n \"status\": [\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n },\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n }\n ]\n },\n \"observationVariableDbIds\": [\n \"\",\n \"\"\n ],\n \"result\": {\n \"data\": [\n [\n \"\",\n \"\"\n ],\n [\n \"\",\n \"\"\n ]\n ]\n }\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies//table"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 1,\n \"totalCount\": 1,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"observations\": [\n {\n \"observationDbId\": \"f439cdc6-768f-4d11-b66c-489d980b3d3b\",\n \"observationUnitDbId\": \"ee89a58d-b104-437b-9cb4-7b500eaafa11\",\n \"observationVariableDbId\": \"MO_123:100002\"\n }\n ]\n }\n}"},{"id":"e8d04bf0-719c-471c-9e74-5b192442ad12","name":"Bad Request","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"data\": [\n [\n \"\",\n \"\"\n ],\n [\n \"\",\n \"\"\n ]\n ],\n \"headerRow\": [\n \"\",\n \"\"\n ],\n \"metadata\": {\n \"datafiles\": [\n \"\",\n \"\"\n ],\n \"pagination\": {\n \"currentPage\": \"\",\n \"pageSize\": \"\",\n \"totalCount\": \"\",\n \"totalPages\": \"\"\n },\n \"status\": [\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n },\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n }\n ]\n },\n \"observationVariableDbIds\": [\n \"\",\n \"\"\n ],\n \"result\": {\n \"data\": [\n [\n \"\",\n \"\"\n ],\n [\n \"\",\n \"\"\n ]\n ]\n }\n}"},"url":"https://test-server.brapi.org/brapi/v1/studies//table"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""}],"_postman_id":"f7a19364-32ad-4c7a-a03a-999c0394be8a"}],"id":"3ff84f41-ce80-424b-a2f6-fed196293172","_postman_id":"3ff84f41-ce80-424b-a2f6-fed196293172","description":""},{"name":"Get the details for a specific Study","id":"f02ec3c7-0aa0-45c4-ae6a-1ebbd62dfc33","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/studies/:studyDbId","description":"

Retrieve the information of the study required for field data collection

\n

An additionalInfo field was added to provide a controlled vocabulary for less common data fields.

\n

Linked data

\n
    \n

  • Observation Variables: /brapi/v1/studies/{studyDbId}/observationvariables

    \n
    • \n

  • Germplasm: /brapi/v1/studies/{studyDbId}/germplasm

    \n
    • \n

  • Observation Units: /brapi/v1/studies/{studyDbId}/observationunits

    \n
    • \n

  • Layout: brapi/v1/studies/{studyDbId}/layout

    \n
    • \n
\n","urlObject":{"path":["studies",":studyDbId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

Identifier of the study. Usually a number, could be alphanumeric.

\n","type":"text/plain"},"type":"any","value":"","key":"studyDbId"}]}},"response":[{"id":"5a6d136b-15b6-470b-b2cd-cb871b0613bd","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/studies/"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"66073c1c-98d9-451a-9b5c-b74e301af863","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/studies/"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"7cf139b6-44df-4a12-a7c6-968457b108cd","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/studies/"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"c7e1281d-b59a-4641-a3f1-06b927f02e90","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/studies/"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"ca1deb1a-1457-4653-946b-b16a94ff68a6","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/studies/"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"active\": \"true\",\n \"additionalInfo\": {\n \"studyObjective\": \"Increase yield\"\n },\n \"commonCropName\": \"Tomatillo\",\n \"contacts\": [\n {\n \"contactDbId\": \"1\",\n \"email\": \"a.breeder@brapi.org\",\n \"instituteName\": \"Plant Science Institute\",\n \"name\": \"A. Breeder\",\n \"orcid\": \"0000-0002-0607-8728\",\n \"type\": \"Breeder\"\n },\n {\n \"contactDbId\": \"2\",\n \"email\": \"b.breeder@brapi.org\",\n \"instituteName\": \"Plant Science Institute\",\n \"name\": \"B. Breeder\",\n \"orcid\": \"0000-0002-0607-8729\",\n \"type\": \"Breeder\"\n }\n ],\n \"dataLinks\": [\n {\n \"dataLinkName\": \"image-archive12.zip\",\n \"name\": \"image-archive12.zip\",\n \"type\": \"Image archive\",\n \"url\": \"http://data.inra.fr/archive/multi-spect-flowering.zip\"\n },\n {\n \"dataLinkName\": \"image-archive13.zip\",\n \"name\": \"image-archive13.zip\",\n \"type\": \"Image archive\",\n \"url\": \"http://data.inra.fr/archive/biomass-img.zip\"\n }\n ],\n \"documentationURL\": \"https://brapi.org\",\n \"endDate\": \"2014-01-01T00:00:00.000Z\",\n \"lastUpdate\": {\n \"timestamp\": \"2015-01-01T05:00:00.000Z\",\n \"version\": \"1.1\"\n },\n \"license\": \"https://creativecommons.org/licenses/by/4.0\",\n \"location\": {\n \"abbreviation\": \"L1\",\n \"abreviation\": \"L1\",\n \"additionalInfo\": {\n \"adm1\": \"Junin\",\n \"adm2\": \"Chanchamayo\",\n \"adm3\": \"San Ramon\",\n \"annualMeanTemperature\": \"23\",\n \"annualTotalPrecipitation\": \"360\",\n \"cont\": \"South America\",\n \"creg\": \"LAC\",\n \"local\": \"San Ramon\"\n },\n \"altitude\": 828,\n \"countryCode\": \"PER\",\n \"countryName\": \"Peru\",\n \"documentationURL\": \"https://brapi.org\",\n \"instituteAddress\": \"71 Pilgrim Avenue Chevy Chase MD 20815\",\n \"instituteAdress\": \"71 Pilgrim Avenue Chevy Chase MD 20815\",\n \"instituteName\": \"Plant Science Institute\",\n \"latitude\": -11.1274995803833,\n \"locationDbId\": \"1\",\n \"locationName\": \"Location 1\",\n \"locationType\": \"Storage location\",\n \"longitude\": -75.35639190673828,\n \"name\": \"Location 1\"\n },\n \"seasons\": [\n \"fall 2011\",\n \"winter 2012\"\n ],\n \"startDate\": \"2013-01-01T00:00:00.000Z\",\n \"studyDbId\": \"1001\",\n \"studyDescription\": \"Field yield phenotyping study\",\n \"studyName\": \"Study 1\",\n \"studyType\": \"Yield study\",\n \"studyTypeDbId\": \"2\",\n \"studyTypeName\": \"Yield study\",\n \"trialDbId\": \"101\",\n \"trialName\": \"Peru Yield Trial 1\"\n }\n}"}],"_postman_id":"f02ec3c7-0aa0-45c4-ae6a-1ebbd62dfc33"},{"name":"Get the Germplasm associated with a specific Study","id":"c190f1e5-0c3d-42e0-a983-8f3285a47cd4","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/studies/:studyDbId/germplasm?page=&pageSize=","description":"

Get the available Germplasm which are associated with this study

\n","urlObject":{"path":["studies",":studyDbId","germplasm"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[{"description":{"content":"

Identifier of the study. Usually a number, could be alphanumeric.

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\"URL\": \"string\",\n \"type\": \"OBO\",\n \"url\": \"string\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"scaleDbId\": \"s1\",\n \"scaleName\": \"string\",\n \"validValues\": {\n \"categories\": [\n \"string\"\n ],\n \"max\": 0,\n \"min\": 0\n },\n \"xref\": \"string\"\n },\n \"scientist\": \"Bob\",\n \"status\": \"active\",\n \"submissionTimestamp\": \"2011-06-15T02:12:51.000Z\",\n \"synonyms\": [],\n \"trait\": {\n \"alternativeAbbreviations\": [\n \"string\"\n ],\n \"attribute\": \"string\",\n \"class\": \"string\",\n \"description\": \"string\",\n \"entity\": \"string\",\n \"mainAbbreviation\": \"string\",\n \"name\": \"string\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"string\",\n \"type\": \"OBO\",\n \"url\": \"string\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"status\": \"string\",\n \"synonyms\": [\n \"string\"\n 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\"Bob\",\n \"status\": \"active\",\n \"submissionTimestamp\": \"2011-06-15T02:12:51.000Z\",\n \"synonyms\": [],\n \"trait\": {\n \"alternativeAbbreviations\": [],\n \"attribute\": \"leaf color\",\n \"class\": \"Categorical\",\n \"description\": \"color of leaf sample\",\n \"entity\": \"entity\",\n \"mainAbbreviation\": \"LC\",\n \"name\": \"Leaf Color\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"https://ontology.org/t3\",\n \"type\": \"RDF\",\n \"url\": \"https://ontology.org/t3\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"status\": \"active\",\n \"synonyms\": [],\n \"traitDbId\": \"t3\",\n \"traitName\": \"Leaf Color\",\n \"xref\": \"xref\"\n },\n \"xref\": \"MO_123:100003\"\n }\n ],\n \"studyDbId\": \"1001\",\n \"trialName\": \"Peru Yield Trial 1\"\n }\n}"}],"_postman_id":"3117bf56-6610-401c-839b-a5b9dd667cba"}],"id":"3be9337d-4109-42af-a6bf-53f814e5f405","_postman_id":"3be9337d-4109-42af-a6bf-53f814e5f405","description":""},{"name":"Get the Studies","id":"a32c9a8f-c2d1-4249-9349-658cc31c6985","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/studies?commonCropName=&studyType=&studyTypeDbId=&programDbId=&locationDbId=&seasonDbId=&trialDbId=&studyDbId=&germplasmDbIds=&germplasmDbIds=&observationVariableDbIds=&observationVariableDbIds=&active=&sortBy=&sortOrder=&page=&pageSize=","description":"

Get list of studies

\n

Implementation Notes

\n

StartDate and endDate should be ISO8601 format for dates

\n

See Search Services for additional implementation details.

\n","urlObject":{"path":["studies"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Common name for the crop associated with this study

\n","type":"text/plain"},"key":"commonCropName","value":""},{"description":{"content":"

DEPRECATED in v1.3 - see \"studyTypeDbId\"

\n","type":"text/plain"},"key":"studyType","value":""},{"description":{"content":"

Filter based on study type unique identifier

\n","type":"text/plain"},"key":"studyTypeDbId","value":""},{"description":{"content":"

Program filter to only return studies associated with given program id.

\n","type":"text/plain"},"key":"programDbId","value":""},{"description":{"content":"

Filter by location

\n","type":"text/plain"},"key":"locationDbId","value":""},{"description":{"content":"

Filter by season or year

\n","type":"text/plain"},"key":"seasonDbId","value":""},{"description":{"content":"

Filter by trial

\n","type":"text/plain"},"key":"trialDbId","value":""},{"description":{"content":"

Filter by study DbId

\n","type":"text/plain"},"key":"studyDbId","value":""},{"description":{"content":"

DEPRECATED in v1.3 - see /search/studies

\n","type":"text/plain"},"key":"germplasmDbIds","value":""},{"description":{"content":"

DEPRECATED in v1.3 - see /search/studies

\n","type":"text/plain"},"key":"germplasmDbIds","value":""},{"description":{"content":"

DEPRECATED in v1.3 - see /search/studies

\n","type":"text/plain"},"key":"observationVariableDbIds","value":""},{"description":{"content":"

DEPRECATED in v1.3 - see /search/studies

\n","type":"text/plain"},"key":"observationVariableDbIds","value":""},{"description":{"content":"

Filter active status true/false.

\n","type":"text/plain"},"key":"active","value":""},{"description":{"content":"

Name of the field to sort by.

\n","type":"text/plain"},"key":"sortBy","value":""},{"description":{"content":"

Sort order direction. Ascending/Descending.

\n","type":"text/plain"},"key":"sortOrder","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

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2018-10-08T20:15:11Z - Missing or expired authorization token\""}],"_postman_id":"a32c9a8f-c2d1-4249-9349-658cc31c6985"}],"id":"396b2aca-de6a-48c4-b45f-7718b072e2b9","_postman_id":"396b2aca-de6a-48c4-b45f-7718b072e2b9","description":""},{"name":"studies-search","item":[{"name":"Search Studies (GET)","id":"b40db454-5c30-43bd-9489-45c57628b615","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[],"url":"https://test-server.brapi.org/brapi/v1/studies-search?studyType=&programDbId=&locationDbId=&seasonDbId=&trialDbId=&studyDbId=&germplasmDbIds=&germplasmDbIds=&observationVariableDbIds=&observationVariableDbIds=&page=&pageSize=&active=&sortBy=&sortOrder=","description":"

DEPRECATED in v1.3 - see GET /studies

\n","urlObject":{"path":["studies-search"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Filter based on study type e.g. Nursery, Trial or Genotype.

\n","type":"text/plain"},"key":"studyType","value":""},{"description":{"content":"

Program filter to only return studies associated with given program id.

\n","type":"text/plain"},"key":"programDbId","value":""},{"description":{"content":"

Filter by location

\n","type":"text/plain"},"key":"locationDbId","value":""},{"description":{"content":"

Filter by season or year

\n","type":"text/plain"},"key":"seasonDbId","value":""},{"description":{"content":"

Filter by trial

\n","type":"text/plain"},"key":"trialDbId","value":""},{"description":{"content":"

Filter by study DbId

\n","type":"text/plain"},"key":"studyDbId","value":""},{"description":{"content":"

Filter studies where specified germplasm have been used/tested

\n","type":"text/plain"},"key":"germplasmDbIds","value":""},{"description":{"content":"

Filter studies where specified germplasm have been used/tested

\n","type":"text/plain"},"key":"germplasmDbIds","value":""},{"description":{"content":"

Filter studies where specified observation variables have been measured

\n","type":"text/plain"},"key":"observationVariableDbIds","value":""},{"description":{"content":"

Filter studies where specified observation variables have been measured

\n","type":"text/plain"},"key":"observationVariableDbIds","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""},{"description":{"content":"

Filter active status true/false.

\n","type":"text/plain"},"key":"active","value":""},{"description":{"content":"

Sort order. Name of the field to sort by.

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Sort order direction. Ascending/Descending.

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DEPRECATED in v1.3 - see /search/studies

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HTTP HEADER - Token used for Authorization

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Update an existing trait

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HTTP HEADER - Token used for Authorization

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Call to retrieve a list of traits available in the system and their associated variables.

\n

An Observation Variable has 3 critical parts: A Trait being observed, a Method for making the observation, and a Scale on which the observation can be measured and compared with other observations.

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HTTP HEADER - Token used for Authorization

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Bearer {token_string}

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Create a new trait object in the database

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HTTP HEADER - Token used for Authorization

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Bearer {token_string}

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Retrieve a filtered list of Trials. A Trial is a collection of studies

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Common name for the crop associated with this trial

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Program filter to only return trials associated with given program id.

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Filter by location

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Filter active status true/false.

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Sort order. Name of the field to sorty by.

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Sort order direction: asc/desc

\n","type":"text/plain"},"key":"sortOrder","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

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HTTP HEADER - Token used for Authorization

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Bearer {token_string}

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Get trial by id.

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The internal trialDbId

\n","type":"text/plain"},"type":"any","value":"","key":"trialDbId"}]}},"response":[{"id":"0e18cebc-0108-46b7-a82b-5775e018e138","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/trials/"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"active\": false,\n \"additionalInfo\": {\n \"donorName\": \"Donor1\",\n \"publications\": \"doi:10.2345/GEZG3T23535\",\n \"specialProject\": \"Project1\"\n },\n \"commonCropName\": \"Tomatillo\",\n \"contacts\": [\n {\n \"contactDbId\": \"4\",\n \"email\": \"b.technician@brapi.org\",\n \"instituteName\": \"Plant Science Institute\",\n \"name\": \"B. 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Technician\",\n \"orcid\": \"0000-0002-0607-8731\",\n \"type\": \"Technician\"\n }\n ],\n \"datasetAuthorship\": {\n \"datasetPUI\": \"doi:10.15454/312953986E3\",\n \"license\": \"https://creativecommons.org/licenses/by/4.0\"\n },\n \"datasetAuthorships\": [\n {\n \"datasetPUI\": \"doi:10.15454/312953986E3\",\n \"license\": \"https://creativecommons.org/licenses/by/4.0\"\n }\n ],\n \"documentationURL\": \"https://brapi.org\",\n \"endDate\": \"2013-07-05T00:00:00.000Z\",\n \"programDbId\": \"1\",\n \"programName\": \"Program 1\",\n \"publications\": [\n {\n \"publicationPUI\": \"doi:10.15454/312953986E3\",\n \"publicationReference\": \"https://brapi.org\"\n }\n ],\n \"startDate\": \"2013-01-01T00:00:00.000Z\",\n \"studies\": [\n {\n \"locationDbId\": \"1\",\n \"locationName\": \"Location 1\",\n \"studyDbId\": \"1001\",\n \"studyName\": \"Study 1\"\n },\n {\n \"locationDbId\": \"1\",\n \"locationName\": \"Location 1\",\n \"studyDbId\": \"1002\",\n \"studyName\": \"Study 2\"\n }\n ],\n \"trialDbId\": \"101\",\n \"trialName\": \"Peru Yield Trial 1\"\n }\n}"},{"id":"a3825011-7613-4db3-a8d7-d84026f00302","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/trials/"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"bd943101-45ba-4ec6-83a1-a0b62ef4b9f9","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/trials/"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"ddb68006-d397-428c-9de0-7724b4c91b22","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/trials/"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"fef918a5-609f-44ef-baa6-8228957c726e","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/trials/"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""}],"_postman_id":"11b1a2bb-bbbe-4819-9284-e0ce44be92d0"}],"id":"8850523b-20bd-4849-82ea-d5b17a422b2e","_postman_id":"8850523b-20bd-4849-82ea-d5b17a422b2e","description":""},{"name":"variables","item":[{"name":"Get the Observation Variables","id":"ade28fe2-62ae-4735-a4ff-0c567dc79604","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/variables?page=&pageSize=&observationVariableDbId=&traitClass=","description":"

Call to retrieve a list of observationVariables available in the system.

\n","urlObject":{"path":["variables"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""},{"description":{"content":"

Variable's unique ID

\n","type":"text/plain"},"key":"observationVariableDbId","value":""},{"description":{"content":"

Variable's trait class (phenological, physiological, morphological, etc.)

\n","type":"text/plain"},"key":"traitClass","value":""}],"variable":[]}},"response":[{"id":"2d808fa4-bc27-49ca-a398-f0938b0dde81","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/variables?page=&pageSize=&observationVariableDbId=&traitClass=","host":["https://test-server.brapi.org/brapi/v1"],"path":["variables"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""},{"key":"observationVariableDbId","value":""},{"key":"traitClass","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"57dfd54d-a606-4bff-b1a8-ae52247327db","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/variables?page=&pageSize=&observationVariableDbId=&traitClass=","host":["https://test-server.brapi.org/brapi/v1"],"path":["variables"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""},{"key":"observationVariableDbId","value":""},{"key":"traitClass","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"6d16318f-af36-4e7c-8bca-c413f7869fe8","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/variables?page=&pageSize=&observationVariableDbId=&traitClass=","host":["https://test-server.brapi.org/brapi/v1"],"path":["variables"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""},{"key":"observationVariableDbId","value":""},{"key":"traitClass","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 5,\n \"totalPages\": 3\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"contextOfUse\": [],\n \"crop\": \"maize\",\n \"date\": \"2018-12-05T00:00:00.000Z\",\n \"defaultValue\": \"10\",\n \"documentationURL\": \"https://brapi.org\",\n \"growthStage\": \"1\",\n \"institution\": \"1\",\n \"language\": \"English\",\n \"method\": {\n \"class\": \"Numeric\",\n \"description\": \"Standard rolled measuring tape\",\n \"formula\": \"a^2 + b^2 = c^2\",\n \"methodDbId\": \"m1\",\n \"methodName\": \"Tape Measure\",\n \"name\": \"Tape Measure\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"https://ontology.org/m1\",\n \"type\": \"RDF\",\n \"url\": \"https://ontology.org/m1\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"reference\": \"google.com\"\n },\n \"name\": \"Plant height\",\n \"observationVariableDbId\": \"MO_123:100002\",\n \"observationVariableName\": \"Plant height\",\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"https://ontology.org\",\n \"type\": \"WEBPAGE\",\n \"url\": \"https://ontology.org\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"scale\": {\n \"dataType\": \"Numerical\",\n \"decimalPlaces\": 1,\n \"name\": \"Centimeter\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"https://ontology.org/s1\",\n \"type\": \"OBO\",\n \"url\": \"https://ontology.org/s1\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"scaleDbId\": \"s1\",\n \"scaleName\": \"Centimeter\",\n \"validValues\": {\n \"categories\": [],\n \"max\": 99999,\n \"min\": 0\n },\n \"xref\": \"xref\"\n },\n \"scientist\": \"Bob\",\n \"status\": \"active\",\n \"submissionTimestamp\": \"2011-06-15T02:12:51.000Z\",\n \"synonyms\": [],\n \"trait\": {\n \"alternativeAbbreviations\": [],\n \"attribute\": \"plant height\",\n \"class\": \"Numeric\",\n \"description\": \"plant height\",\n \"entity\": \"entity\",\n \"mainAbbreviation\": \"H\",\n \"name\": \"Plant Height\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"https://ontology.org/t1\",\n \"type\": \"WEBPAGE\",\n \"url\": \"https://ontology.org/t1\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"status\": \"active\",\n \"synonyms\": [],\n \"traitDbId\": \"t1\",\n \"traitName\": \"Plant Height\",\n \"xref\": \"xref\"\n },\n \"xref\": \"MO_123:100002\"\n },\n {\n \"contextOfUse\": [],\n \"crop\": \"maize\",\n \"date\": \"2018-12-05T00:00:00.000Z\",\n \"defaultValue\": \"10\",\n \"documentationURL\": \"https://brapi.org\",\n \"growthStage\": \"1\",\n \"institution\": \"1\",\n \"language\": \"English\",\n \"method\": {\n \"class\": \"Categorical\",\n \"description\": \"Comparing sample color to standard color palette\",\n \"formula\": \"NA\",\n \"methodDbId\": \"m3\",\n \"methodName\": \"Standard Color Palette\",\n \"name\": \"Standard Color Palette\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"https://ontology.org/m3\",\n \"type\": \"OBO\",\n \"url\": \"https://ontology.org/m3\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"reference\": \"google.com\"\n },\n \"name\": \"Carotenoid\",\n \"observationVariableDbId\": \"MO_123:100003\",\n \"observationVariableName\": \"Carotenoid\",\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"https://ontology.org\",\n \"type\": \"WEBPAGE\",\n \"url\": \"https://ontology.org\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"scale\": {\n \"dataType\": \"Nominal\",\n \"decimalPlaces\": 0,\n \"name\": \"Color\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"https://ontology.org/s3\",\n \"type\": \"WEBPAGE\",\n \"url\": \"https://ontology.org/s3\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"scaleDbId\": \"s3\",\n \"scaleName\": \"Color\",\n \"validValues\": {\n \"categories\": [\n \"dark red\",\n \"red\",\n \"dark blue\",\n \"blue\",\n \"black\"\n ],\n \"max\": 0,\n \"min\": 0\n },\n \"xref\": \"xref\"\n },\n \"scientist\": \"Bob\",\n \"status\": \"active\",\n \"submissionTimestamp\": \"2011-06-15T02:12:51.000Z\",\n \"synonyms\": [],\n \"trait\": {\n \"alternativeAbbreviations\": [],\n \"attribute\": \"leaf color\",\n \"class\": \"Categorical\",\n \"description\": \"color of leaf sample\",\n \"entity\": \"entity\",\n \"mainAbbreviation\": \"LC\",\n \"name\": \"Leaf Color\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"https://ontology.org/t3\",\n \"type\": \"RDF\",\n \"url\": \"https://ontology.org/t3\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"status\": \"active\",\n \"synonyms\": [],\n \"traitDbId\": \"t3\",\n \"traitName\": \"Leaf Color\",\n \"xref\": \"xref\"\n },\n \"xref\": \"MO_123:100003\"\n }\n ]\n }\n}"},{"id":"6d6c537e-806a-4d34-adbd-2d66f90483e6","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/variables?page=&pageSize=&observationVariableDbId=&traitClass=","host":["https://test-server.brapi.org/brapi/v1"],"path":["variables"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""},{"key":"observationVariableDbId","value":""},{"key":"traitClass","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""}],"_postman_id":"ade28fe2-62ae-4735-a4ff-0c567dc79604"},{"name":"Variable data type list","id":"e6bb5367-6f6a-48f2-b582-6ae1e60b93de","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[],"url":"https://test-server.brapi.org/brapi/v1/variables/datatypes?page=&pageSize=","description":"

DEPRECATED in v1.3 - See documentation on BrAPI fixed set of data types, references from the Crop Ontology

\n","urlObject":{"path":["variables","datatypes"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"122e8102-4524-4edb-9f96-1ecf235ca3c6","name":"OK","originalRequest":{"method":"GET","header":[],"url":{"raw":"https://test-server.brapi.org/brapi/v1/variables/datatypes?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["variables","datatypes"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 2,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n \"Nominal\",\n \"Numerical\"\n ]\n }\n}"}],"_postman_id":"e6bb5367-6f6a-48f2-b582-6ae1e60b93de"},{"name":"Get the details for a specific Observation Variable","id":"ad94cb3e-e1c5-4d41-b021-4bad2c61f56e","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/variables/:observationVariableDbId","description":"

Retrieve variable details

\n","urlObject":{"path":["variables",":observationVariableDbId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

string id of the variable

\n","type":"text/plain"},"type":"any","value":"","key":"observationVariableDbId"}]}},"response":[{"id":"1328c554-d2cf-4c33-8ffd-de730321a6d9","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/variables/"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"contextOfUse\": [],\n \"crop\": \"maize\",\n \"date\": \"2018-12-05T00:00:00.000Z\",\n \"defaultValue\": \"10\",\n \"documentationURL\": \"https://brapi.org\",\n \"growthStage\": \"1\",\n \"institution\": \"1\",\n \"language\": \"English\",\n \"method\": {\n \"class\": \"Numeric\",\n \"description\": \"Standard rolled measuring tape\",\n \"formula\": \"a^2 + b^2 = c^2\",\n \"methodDbId\": \"m1\",\n \"methodName\": \"Tape Measure\",\n \"name\": \"Tape Measure\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"https://ontology.org/m1\",\n \"type\": \"RDF\",\n \"url\": \"https://ontology.org/m1\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"reference\": \"google.com\"\n },\n \"name\": \"Plant height\",\n \"observationVariableDbId\": \"MO_123:100002\",\n \"observationVariableName\": \"Plant height\",\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"https://ontology.org\",\n \"type\": \"WEBPAGE\",\n \"url\": \"https://ontology.org\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"scale\": {\n \"dataType\": \"Numerical\",\n \"decimalPlaces\": 1,\n \"name\": \"Centimeter\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"https://ontology.org/s1\",\n \"type\": \"OBO\",\n \"url\": \"https://ontology.org/s1\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"scaleDbId\": \"s1\",\n \"scaleName\": \"Centimeter\",\n \"validValues\": {\n \"categories\": [],\n \"max\": 99999,\n \"min\": 0\n },\n \"xref\": \"xref\"\n },\n \"scientist\": \"Bob\",\n \"status\": \"active\",\n \"submissionTimestamp\": \"2011-06-15T02:12:51.000Z\",\n \"synonyms\": [],\n \"trait\": {\n \"alternativeAbbreviations\": [],\n \"attribute\": \"plant height\",\n \"class\": \"Numeric\",\n \"description\": \"plant height\",\n \"entity\": \"entity\",\n \"mainAbbreviation\": \"H\",\n \"name\": \"Plant Height\",\n \"ontologyReference\": {\n \"documentationLinks\": [\n {\n \"URL\": \"https://ontology.org/t1\",\n \"type\": \"WEBPAGE\",\n \"url\": \"https://ontology.org/t1\"\n }\n ],\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n },\n \"status\": \"active\",\n \"synonyms\": [],\n \"traitDbId\": \"t1\",\n \"traitName\": \"Plant Height\",\n \"xref\": \"xref\"\n },\n \"xref\": \"MO_123:100002\"\n }\n}"},{"id":"3adb72fc-a0a2-45f2-b06d-b6f87d93cb43","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/variables/"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"3bfd84f4-02e0-4651-a76a-da43169ecdc0","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/variables/"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"3e76dd5e-6160-435b-a3aa-6adcd39721d6","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/variables/"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"e8561617-6ebc-41e2-a963-0c33d7479ffb","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/variables/"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""}],"_postman_id":"ad94cb3e-e1c5-4d41-b021-4bad2c61f56e"}],"id":"557894ca-24e1-4a55-b269-cecada7fb5e5","_postman_id":"557894ca-24e1-4a55-b269-cecada7fb5e5","description":""},{"name":"vendor","item":[{"name":"orders","item":[{"name":"{order Id}","item":[{"name":"Get the Plates for a specific Order","id":"cac6e573-3bfc-4f0c-90c7-0b82e3ec5577","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders/:orderId/plates","description":"

Retrieve the plate and sample details of an order being processed

\n","urlObject":{"path":["vendor","orders",":orderId","plates"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

The order id returned by the vendor when the order was successfully submitted.

\n","type":"text/plain"},"type":"any","value":"","key":"orderId"}]}},"response":[{"id":"4c9c9303-3c30-4c4d-9600-05f6aa17d465","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders//plates"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"4fae0bc1-e6c5-46be-9c31-e5113f22664b","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders//plates"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"bed651f8-32f3-487d-b598-b827de34df0b","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders//plates"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"d294d255-d613-46c0-9ac6-8ca29a7be64d","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders//plates"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"ecf2df90-6126-47f1-86f2-0f070890db16","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders//plates"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [\n \"\",\n \"\"\n ],\n \"pagination\": {\n \"currentPage\": \"\",\n \"pageSize\": \"\",\n \"totalCount\": \"\",\n \"totalPages\": \"\"\n },\n \"status\": [\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n },\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n }\n ]\n },\n \"result\": {\n \"data\": [\n {\n \"clientPlateBarcode\": \"\",\n \"clientPlateId\": \"\",\n \"sampleSubmissionFormat\": \"\",\n \"samples\": [\n {\n \"clientSampleBarCode\": \"\",\n \"clientSampleId\": \"\",\n \"column\": \"\",\n \"comments\": \"\",\n \"concentration\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"organismName\": \"\",\n \"row\": \"\",\n \"speciesName\": \"\",\n \"taxonomyOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"tissueType\": \"\",\n \"tissueTypeOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"volume\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"well\": \"\"\n },\n {\n \"clientSampleBarCode\": \"\",\n \"clientSampleId\": \"\",\n \"column\": \"\",\n \"comments\": \"\",\n \"concentration\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"organismName\": \"\",\n \"row\": \"\",\n \"speciesName\": \"\",\n \"taxonomyOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"tissueType\": \"\",\n \"tissueTypeOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"volume\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"well\": \"\"\n }\n ]\n },\n {\n \"clientPlateBarcode\": \"\",\n \"clientPlateId\": \"\",\n \"sampleSubmissionFormat\": \"\",\n \"samples\": [\n {\n \"clientSampleBarCode\": \"\",\n \"clientSampleId\": \"\",\n \"column\": \"\",\n \"comments\": \"\",\n \"concentration\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"organismName\": \"\",\n \"row\": \"\",\n \"speciesName\": \"\",\n \"taxonomyOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"tissueType\": \"\",\n \"tissueTypeOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"volume\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"well\": \"\"\n },\n {\n \"clientSampleBarCode\": \"\",\n \"clientSampleId\": \"\",\n \"column\": \"\",\n \"comments\": \"\",\n \"concentration\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"organismName\": \"\",\n \"row\": \"\",\n \"speciesName\": \"\",\n \"taxonomyOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"tissueType\": \"\",\n \"tissueTypeOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"volume\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"well\": \"\"\n }\n ]\n }\n ]\n }\n}"}],"_postman_id":"cac6e573-3bfc-4f0c-90c7-0b82e3ec5577"},{"name":"Get the results of a specific Order","id":"3beb09f8-1e1d-43ba-bb71-d3801b49f5b5","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders/:orderId/results","description":"

Retrieve the data files generated by the vendors analysis

\n","urlObject":{"path":["vendor","orders",":orderId","results"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

The order id returned by the vendor when the order was successfully submitted.

\n","type":"text/plain"},"type":"any","value":"","key":"orderId"}]}},"response":[{"id":"1740ef13-28c5-4c5d-9316-cc11db05ac0e","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders//results"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [\n \"\",\n \"\"\n ],\n \"pagination\": {\n \"currentPage\": \"\",\n \"pageSize\": \"\",\n \"totalCount\": \"\",\n \"totalPages\": \"\"\n },\n \"status\": [\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n },\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n }\n ]\n },\n \"result\": {\n \"data\": [\n {\n \"clientSampleIds\": [\n \"\",\n \"\"\n ],\n \"fileName\": \"\",\n \"fileType\": \"\",\n \"fileURL\": \"\",\n \"additionalInfo\": \"\",\n \"md5sum\": \"\"\n },\n {\n \"clientSampleIds\": [\n \"\",\n \"\"\n ],\n \"fileName\": \"\",\n \"fileType\": \"\",\n \"fileURL\": \"\",\n \"additionalInfo\": \"\",\n \"md5sum\": \"\"\n }\n ]\n }\n}"},{"id":"e0635505-2aa5-45f9-ae16-0a63af055a0b","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders//results"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"e9525a35-961f-4106-b9c1-aa652fa6c605","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders//results"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"ef68cc9c-d6ec-4ce0-a7ac-f926cfbce753","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders//results"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"f9fd06e9-e654-4700-90f8-f15bcbd21612","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders//results"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""}],"_postman_id":"3beb09f8-1e1d-43ba-bb71-d3801b49f5b5"},{"name":"Get the status of a specific Order","id":"6550e0a5-0e25-4881-b7af-a5a00e8a1570","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders/:orderId/status","description":"

Retrieve the current status of an order being processed

\n","urlObject":{"path":["vendor","orders",":orderId","status"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"

The order id returned by the vendor when the order was successfully submitted.

\n","type":"text/plain"},"type":"any","value":"","key":"orderId"}]}},"response":[{"id":"533de070-658d-4c75-be16-74894f705f6f","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders//status"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"b7f74247-9870-481d-ba35-4d1e0965f420","name":"Not Found","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders//status"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"bf3c37e0-b857-47e4-a01d-743989556932","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders//status"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [\n \"\",\n \"\"\n ],\n \"pagination\": {\n \"currentPage\": \"\",\n \"pageSize\": \"\",\n \"totalCount\": \"\",\n \"totalPages\": \"\"\n },\n \"status\": [\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n },\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n }\n ]\n },\n \"result\": {\n \"status\": \"\"\n }\n}"},{"id":"d9d24737-352a-4777-b260-1d1df7747c37","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders//status"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"ec848253-4cfc-446e-903e-501d14f8b99b","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders//status"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""}],"_postman_id":"6550e0a5-0e25-4881-b7af-a5a00e8a1570"}],"id":"12e03e13-644b-4317-9b60-01be17f77a72","_postman_id":"12e03e13-644b-4317-9b60-01be17f77a72","description":""},{"name":"List current available orders","id":"990322ea-e6e8-46ea-8c09-e9e08a097277","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/vendor/orders?orderId=&submissionId=","description":"

List current available orders

\n","urlObject":{"path":["vendor","orders"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

The order id returned by the vendor when the order was successfully submitted. From response of \"POST /vendor/orders\"

\n","type":"text/plain"},"key":"orderId","value":""},{"description":{"content":"

The submission id returned by the vendor when a set of plates was successfully submitted. From response of \"POST /vendor/plates\"

\n","type":"text/plain"},"key":"submissionId","value":""}],"variable":[]}},"response":[{"id":"22e3074a-9350-46e2-bb88-2a0ffc7cb66a","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/vendor/orders?orderId=&submissionId=","host":["https://test-server.brapi.org/brapi/v1"],"path":["vendor","orders"],"query":[{"key":"orderId","value":""},{"key":"submissionId","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"dad6f0e5-6221-4c2d-bc5a-d431ff37890c","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/vendor/orders?orderId=&submissionId=","host":["https://test-server.brapi.org/brapi/v1"],"path":["vendor","orders"],"query":[{"key":"orderId","value":""},{"key":"submissionId","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [\n \"\",\n \"\"\n ],\n \"pagination\": {\n \"currentPage\": \"\",\n \"pageSize\": \"\",\n \"totalCount\": \"\",\n \"totalPages\": \"\"\n },\n \"status\": [\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n },\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n }\n ]\n },\n \"result\": {\n \"data\": [\n {\n \"clientId\": \"\",\n \"numberOfSamples\": \"\",\n \"orderId\": \"\",\n \"requiredServiceInfo\": \"\",\n \"serviceId\": \"\"\n },\n {\n \"clientId\": \"\",\n \"numberOfSamples\": \"\",\n \"orderId\": \"\",\n \"requiredServiceInfo\": \"\",\n \"serviceId\": \"\"\n }\n ]\n }\n}"},{"id":"fd141e10-bd6f-4cac-bbe6-893019d363ca","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/vendor/orders?orderId=&submissionId=","host":["https://test-server.brapi.org/brapi/v1"],"path":["vendor","orders"],"query":[{"key":"orderId","value":""},{"key":"submissionId","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"febcc3de-45c8-4208-a648-4fe2b26b1ee1","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/vendor/orders?orderId=&submissionId=","host":["https://test-server.brapi.org/brapi/v1"],"path":["vendor","orders"],"query":[{"key":"orderId","value":""},{"key":"submissionId","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""}],"_postman_id":"990322ea-e6e8-46ea-8c09-e9e08a097277"},{"name":"Submit New Order","id":"3d444649-3f3b-45c4-bb03-f4a6772616bd","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"POST","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

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Submit a new order to a vendor

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HTTP HEADER - Token used for Authorization

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Bearer {token_string}

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Submit a new set of Sample data

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2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"cca601e8-f9ae-4ee5-a994-b63219538763","name":"Bad Request","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"clientId\": \"\",\n \"numberOfSamples\": \"\",\n \"plates\": [\n {\n \"clientPlateBarcode\": \"\",\n \"clientPlateId\": \"\",\n \"sampleSubmissionFormat\": \"\",\n \"samples\": [\n {\n \"clientSampleBarCode\": \"\",\n \"clientSampleId\": \"\",\n \"column\": \"\",\n \"comments\": \"\",\n \"concentration\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"organismName\": \"\",\n \"row\": \"\",\n \"speciesName\": \"\",\n \"taxonomyOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"tissueType\": \"\",\n \"tissueTypeOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"volume\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"well\": \"\"\n },\n {\n \"clientSampleBarCode\": \"\",\n \"clientSampleId\": \"\",\n \"column\": \"\",\n \"comments\": \"\",\n \"concentration\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"organismName\": \"\",\n \"row\": \"\",\n \"speciesName\": \"\",\n \"taxonomyOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"tissueType\": \"\",\n \"tissueTypeOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"volume\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"well\": \"\"\n }\n ]\n },\n {\n \"clientPlateBarcode\": \"\",\n \"clientPlateId\": \"\",\n \"sampleSubmissionFormat\": \"\",\n \"samples\": [\n {\n \"clientSampleBarCode\": \"\",\n \"clientSampleId\": \"\",\n \"column\": \"\",\n \"comments\": \"\",\n \"concentration\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"organismName\": \"\",\n \"row\": \"\",\n \"speciesName\": \"\",\n \"taxonomyOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"tissueType\": \"\",\n \"tissueTypeOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"volume\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"well\": \"\"\n },\n {\n \"clientSampleBarCode\": \"\",\n \"clientSampleId\": \"\",\n \"column\": \"\",\n \"comments\": \"\",\n \"concentration\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"organismName\": \"\",\n \"row\": \"\",\n \"speciesName\": \"\",\n \"taxonomyOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"tissueType\": \"\",\n \"tissueTypeOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"volume\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"well\": \"\"\n }\n ]\n }\n ],\n \"sampleType\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/vendor/plates"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"d4907d4d-9300-4b6f-af24-0b2a81955d72","name":"Forbidden","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"clientId\": \"\",\n \"numberOfSamples\": \"\",\n \"plates\": [\n {\n \"clientPlateBarcode\": \"\",\n \"clientPlateId\": \"\",\n \"sampleSubmissionFormat\": \"\",\n \"samples\": [\n {\n \"clientSampleBarCode\": \"\",\n \"clientSampleId\": \"\",\n \"column\": \"\",\n \"comments\": \"\",\n \"concentration\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"organismName\": \"\",\n \"row\": \"\",\n \"speciesName\": \"\",\n \"taxonomyOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"tissueType\": \"\",\n \"tissueTypeOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"volume\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"well\": \"\"\n },\n {\n \"clientSampleBarCode\": \"\",\n \"clientSampleId\": \"\",\n \"column\": \"\",\n \"comments\": \"\",\n \"concentration\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"organismName\": \"\",\n \"row\": \"\",\n \"speciesName\": \"\",\n \"taxonomyOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"tissueType\": \"\",\n \"tissueTypeOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"volume\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"well\": \"\"\n }\n ]\n },\n {\n \"clientPlateBarcode\": \"\",\n \"clientPlateId\": \"\",\n \"sampleSubmissionFormat\": \"\",\n \"samples\": [\n {\n \"clientSampleBarCode\": \"\",\n \"clientSampleId\": \"\",\n \"column\": \"\",\n \"comments\": \"\",\n \"concentration\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"organismName\": \"\",\n \"row\": \"\",\n \"speciesName\": \"\",\n \"taxonomyOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"tissueType\": \"\",\n \"tissueTypeOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"volume\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"well\": \"\"\n },\n {\n \"clientSampleBarCode\": \"\",\n \"clientSampleId\": \"\",\n \"column\": \"\",\n \"comments\": \"\",\n \"concentration\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"organismName\": \"\",\n \"row\": \"\",\n \"speciesName\": \"\",\n \"taxonomyOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"tissueType\": \"\",\n \"tissueTypeOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"volume\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"well\": \"\"\n }\n ]\n }\n ],\n \"sampleType\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/vendor/plates"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"f74c6f4f-bd84-4a96-a0b6-ced3cd5606c9","name":"OK","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"clientId\": \"\",\n \"numberOfSamples\": \"\",\n \"plates\": [\n {\n \"clientPlateBarcode\": \"\",\n \"clientPlateId\": \"\",\n \"sampleSubmissionFormat\": \"\",\n \"samples\": [\n {\n \"clientSampleBarCode\": \"\",\n \"clientSampleId\": \"\",\n \"column\": \"\",\n \"comments\": \"\",\n \"concentration\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"organismName\": \"\",\n \"row\": \"\",\n \"speciesName\": \"\",\n \"taxonomyOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"tissueType\": \"\",\n \"tissueTypeOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"volume\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"well\": \"\"\n },\n {\n \"clientSampleBarCode\": \"\",\n \"clientSampleId\": \"\",\n \"column\": \"\",\n \"comments\": \"\",\n \"concentration\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"organismName\": \"\",\n \"row\": \"\",\n \"speciesName\": \"\",\n \"taxonomyOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"tissueType\": \"\",\n \"tissueTypeOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"volume\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"well\": \"\"\n }\n ]\n },\n {\n \"clientPlateBarcode\": \"\",\n \"clientPlateId\": \"\",\n \"sampleSubmissionFormat\": \"\",\n \"samples\": [\n {\n \"clientSampleBarCode\": \"\",\n \"clientSampleId\": \"\",\n \"column\": \"\",\n \"comments\": \"\",\n \"concentration\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"organismName\": \"\",\n \"row\": \"\",\n \"speciesName\": \"\",\n \"taxonomyOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"tissueType\": \"\",\n \"tissueTypeOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"volume\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"well\": \"\"\n },\n {\n \"clientSampleBarCode\": \"\",\n \"clientSampleId\": \"\",\n \"column\": \"\",\n \"comments\": \"\",\n \"concentration\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"organismName\": \"\",\n \"row\": \"\",\n \"speciesName\": \"\",\n \"taxonomyOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"tissueType\": \"\",\n \"tissueTypeOntologyReference\": {\n \"ontologyID\": \"\",\n \"ontologyPrefix\": \"\",\n \"ontologyTerm\": \"\"\n },\n \"volume\": {\n \"units\": \"\",\n \"value\": \"\"\n },\n \"well\": \"\"\n }\n ]\n }\n ],\n \"sampleType\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/vendor/plates"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{}"}],"_postman_id":"e1eb1cb2-54d0-41bd-b644-989a7a5c212f"},{"name":"Get the data for a submitted set of plates","id":"f5d5a59e-532f-4ae5-9db6-65344906ac5b","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[],"url":"https://test-server.brapi.org/brapi/v1/vendor/plates/:submissionId","description":"

Get data for a submitted set of plates

\n","urlObject":{"path":["vendor","plates",":submissionId"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[{"description":{"content":"","type":"text/plain"},"type":"any","value":"","key":"submissionId"}]}},"response":[{"id":"7282ebd1-5251-475d-a69b-6d9d8e8c38de","name":"Not Found","originalRequest":{"method":"GET","header":[],"url":"https://test-server.brapi.org/brapi/v1/vendor/plates/"},"status":"Not Found","code":404,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - The requested object DbId is not found\""},{"id":"81b5afed-5147-4dd2-9a05-e2ddc6a5fa87","name":"Forbidden","originalRequest":{"method":"GET","header":[],"url":"https://test-server.brapi.org/brapi/v1/vendor/plates/"},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"caacb9f2-a412-4013-888e-1c8c37ee4559","name":"Unauthorized","originalRequest":{"method":"GET","header":[],"url":"https://test-server.brapi.org/brapi/v1/vendor/plates/"},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"d4775d2f-6738-4d08-83c1-1548194fd18b","name":"Bad Request","originalRequest":{"method":"GET","header":[],"url":"https://test-server.brapi.org/brapi/v1/vendor/plates/"},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"fb0bf97d-864e-4e73-ba12-76b1cce74df9","name":"OK","originalRequest":{"method":"GET","header":[],"url":"https://test-server.brapi.org/brapi/v1/vendor/plates/"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n }\n}"}],"_postman_id":"f5d5a59e-532f-4ae5-9db6-65344906ac5b"}],"id":"588bd7d4-9f38-48af-979d-1e3cfa73ed6b","_postman_id":"588bd7d4-9f38-48af-979d-1e3cfa73ed6b","description":""},{"name":"Get the Vendor Specifications","id":"5ccdab18-7402-47ef-934b-5614306a908f","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/vendor/specifications","description":"

Defines the plate format specification for the vendor.

\n","urlObject":{"path":["vendor","specifications"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[]}},"response":[{"id":"10dfe1d9-eb6d-4b3f-8792-152e0d3b3111","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":"https://test-server.brapi.org/brapi/v1/vendor/specifications"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [\n \"\",\n \"\"\n ],\n \"pagination\": {\n \"currentPage\": \"\",\n \"pageSize\": \"\",\n \"totalCount\": \"\",\n \"totalPages\": \"\"\n },\n \"status\": [\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n },\n {\n \"message\": \"\",\n \"messageType\": \"\",\n \"code\": \"\"\n }\n ]\n },\n \"result\": {\n \"additionalInfo\": \"\",\n \"services\": [\n {\n \"serviceDescription\": \"\",\n \"serviceId\": \"\",\n \"serviceName\": \"\",\n \"servicePlatformMarkerType\": \"\",\n \"servicePlatformName\": \"\",\n \"specificRequirements\": \"\"\n },\n {\n \"serviceDescription\": \"\",\n \"serviceId\": \"\",\n \"serviceName\": \"\",\n \"servicePlatformMarkerType\": \"\",\n \"servicePlatformName\": \"\",\n \"specificRequirements\": \"\"\n }\n ],\n \"vendorContact\": {\n \"vendorAddress\": \"\",\n \"vendorCity\": \"\",\n \"vendorContactName\": \"\",\n \"vendorCountry\": \"\",\n \"vendorDescription\": \"\",\n \"vendorEmail\": \"\",\n \"vendorName\": \"\",\n \"vendorPhone\": \"\",\n \"vendorURL\": \"\"\n }\n }\n}"}],"_postman_id":"5ccdab18-7402-47ef-934b-5614306a908f"}],"id":"4173f186-978d-4d66-a336-b9a8bfeffe64","_postman_id":"4173f186-978d-4d66-a336-b9a8bfeffe64","description":""},{"name":"Get the Allele Matrix summaries","id":"89268ba4-094e-4e19-a259-29761f3f0c7e","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

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Bearer {token_string}

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This resource is used for reading and writing genomic matrices

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GET provides a list of available matrices, optionally filtered by study;

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restricts the list of matrices to a specific study.

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Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"464a9272-2902-48a5-a1bf-82f07244eddd","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/allelematrices?studyDbId=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["allelematrices"],"query":[{"key":"studyDbId","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"85523f27-87c1-41be-b72e-2e3367bb754c","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/allelematrices?studyDbId=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["allelematrices"],"query":[{"key":"studyDbId","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"86ff6366-b819-44a8-9113-ece905f8b74a","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/allelematrices?studyDbId=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["allelematrices"],"query":[{"key":"studyDbId","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"f8c5b5fe-e701-4cdc-87d0-cbd6bddf1acd","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/allelematrices?studyDbId=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["allelematrices"],"query":[{"key":"studyDbId","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 1,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"description\": \"example matrix\",\n \"lastUpdated\": \"2018-05-03T15:03:56.000Z\",\n \"matrixDbId\": \"mat1\",\n \"matrixName\": \"Example Matrix\",\n \"name\": \"Example Matrix\",\n \"studyDbId\": \"1001\"\n }\n ]\n }\n}"}],"_postman_id":"89268ba4-094e-4e19-a259-29761f3f0c7e"},{"name":"Get the list of implemented Calls","id":"54f1f536-5adb-422e-b76f-acd64f9d5ccf","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/calls?datatype=&dataType=&page=&pageSize=","description":"

Implementation Notes\nHaving a consistent structure for the path string of each call is very important for teams to be able to connect and find errors. Read more on Github.\nHere are the rules for the path of each call that should be returned

\n

Every word in the call path should match the documentation exactly, both in spelling and capitalization. Note that path strings are all lower case, but path parameters are camel case.

\n

Each path should start relative to \"/\" and therefore should not include \"/\"

\n

No leading or trailing slashes (\"/\")

\n

Path parameters are wrapped in curly braces (\"{}\"). The name of the path parameter should be spelled exactly as it is specified in the documentation.

\n

Examples GOOD \"call\": \"germplasm/{germplasmDbId}/markerprofiles\" BAD \"call\": \"germplasm/{id}/markerprofiles\" BAD \"call\": \"germplasm/{germplasmDbId}/markerProfiles\" BAD \"call\": \"germplasm/{germplasmdbid}/markerprofiles\" BAD \"call\": \"brapi/v1/germplasm/{germplasmDbId}/markerprofiles\" BAD \"call\": \"/germplasm/{germplasmDbId}/markerprofiles/\" BAD \"call\": \"germplasm//markerprofiles\"

\n

test-server.brapi.org/brapi/v1/calls

\n","urlObject":{"path":["calls"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

DEPRECATED in v1.3 - see dataType (camel case)

\n","type":"text/plain"},"key":"datatype","value":""},{"description":{"content":"

The data format supported by the call. Example: json

\n","type":"text/plain"},"key":"dataType","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"96571c07-7a86-4a92-8af0-6e8deb81e872","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/calls?datatype=&dataType=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["calls"],"query":[{"key":"datatype","value":""},{"key":"dataType","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"af52cd2a-d910-4119-aa02-14b4aa1b0f60","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/calls?datatype=&dataType=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["calls"],"query":[{"key":"datatype","value":""},{"key":"dataType","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 103,\n \"totalPages\": 52\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"call\": \"allelematrices\",\n \"dataTypes\": [\n \"application/json\"\n ],\n \"datatypes\": [\n \"application/json\"\n ],\n \"methods\": [\n \"GET\"\n ],\n \"versions\": [\n \"1.0\",\n \"1.1\",\n \"1.2\",\n \"1.3\"\n ]\n },\n {\n \"call\": \"allelematrices-search\",\n \"dataTypes\": [\n \"application/json\"\n ],\n \"datatypes\": [\n \"application/json\"\n ],\n \"methods\": [\n \"GET\",\n \"POST\"\n ],\n \"versions\": [\n \"1.2\",\n \"1.3\"\n ]\n }\n ]\n }\n}"},{"id":"c5e9d672-e9f4-4bc7-bdb7-7b90e176982d","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/calls?datatype=&dataType=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["calls"],"query":[{"key":"datatype","value":""},{"key":"dataType","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"c7acd15d-b676-4a5f-9686-708df2b951a5","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/calls?datatype=&dataType=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["calls"],"query":[{"key":"datatype","value":""},{"key":"dataType","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""}],"_postman_id":"54f1f536-5adb-422e-b76f-acd64f9d5ccf"},{"name":"Get the Common Crop Names","id":"269322da-1b01-4bc9-90bc-00a37f1a24c3","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/commoncropnames?page=&pageSize=","description":"

List the common crop names for the crops available in a database server.

\n

This call is required for multi-crop systems where data from multiple crops may be stored in the same database server. A distinct database server is defined by everything in the URL before \"/brapi/v1\", including host name and base path.

\n

This call is recommended for single crop systems to be compatible with multi-crop clients. For a single crop system the response should contain an array with exactly 1 element.

\n

The common crop name can be used as a search parameter for Programs, Studies, and Germplasm.

\n

test-server.brapi.org/brapi/v1/commonCropNames

\n","urlObject":{"path":["commoncropnames"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"454c2484-3969-4c9a-b488-aa75c96284c7","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/commoncropnames?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["commoncropnames"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 2,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n \"Tomatillo\",\n \"Paw Paw\"\n ]\n }\n}"},{"id":"7fd9564f-d3ee-44c5-ad50-3825108e8057","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/commoncropnames?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["commoncropnames"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"aba45aa4-edb4-43b9-96d4-e650cee2a5ae","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/commoncropnames?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["commoncropnames"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"d0a84eba-fb68-4815-a4d6-b12199b0c780","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/commoncropnames?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["commoncropnames"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""}],"_postman_id":"269322da-1b01-4bc9-90bc-00a37f1a24c3"},{"name":"List supported crops","id":"2c09388d-b2d9-4d02-b2d4-eb42b0d6cb13","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[],"url":"https://test-server.brapi.org/brapi/v1/crops?page=&pageSize=","description":"

For multi crop systems this is a useful call to list all the supported crops.

\n

test-server.brapi.org/brapi/v1/crops

\n","urlObject":{"path":["crops"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"a7ad653a-52b7-42d3-9ae3-58e3223cba55","name":"OK","originalRequest":{"method":"GET","header":[],"url":{"raw":"https://test-server.brapi.org/brapi/v1/crops?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["crops"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 2,\n \"pageSize\": 1000,\n \"totalCount\": 2,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": []\n }\n}"}],"_postman_id":"2c09388d-b2d9-4d02-b2d4-eb42b0d6cb13"},{"name":"Login","id":"afbdc98f-7ba1-42ad-8abc-390d651da05b","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"POST","header":[{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"client_id\": \"\",\n \"grant_type\": \"\",\n \"password\": \"\",\n \"username\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/login","description":"

Implemented by: Tripal Brapi module, Cassavabase, Germinate, BMS

\n

Used by: Flapjack, BMS

\n

Response data types\nException: the result is not embeded in a \"result\" structure in order to be (one day) OAuth2 compliant. It's also why the anwser mixes snake_case and camelCase.\nFor login, returns a hash with the user name and the token as the value. A metadata key is also present (but usually set to null, unless an error condition occurs).

\n

For logout, returns an empty resource. A token to remove could be provided (amdin interface) but it is not required. By default, current user token will be removed.

\n
\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n\n
VariableDatatypeDescriptionRequired
userDisplayNamestringthe display name of the userY
access_tokenstringthe access token for the sessionY
expires_inintegerThe lifetime in seconds of the access tokenY
\n
","urlObject":{"path":["login"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[]}},"response":[{"id":"1a6825c7-775a-46f6-b554-74b1aa176557","name":"Created","originalRequest":{"method":"POST","header":[{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"client_id\": \"\",\n \"grant_type\": \"\",\n \"password\": \"\",\n \"username\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/login"},"status":"Created","code":201,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"access_token\": \"R6gKDBRxM4HLj6eGi4u5HkQjYoIBTPfvtZzUD8TUzg4\",\n \"expires_in\": \"The lifetime in seconds of the access token\",\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"userDisplayName\": \"John Smith\"\n}"}],"_postman_id":"afbdc98f-7ba1-42ad-8abc-390d651da05b"},{"name":"Logout","id":"65487df2-8d44-4e18-9e7c-9af4453196ed","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"DELETE","header":[],"url":"https://test-server.brapi.org/brapi/v1/logout","description":"

Implemented by: Tripal Brapi module, Cassavabase, Germinate, BMS

\n

Used by: Flapjack, BMS

\n

For logout, returns an empty resource. A token to remove could be provided (amdin interface) but it is not required. By default, current user token will be removed.

\n","urlObject":{"path":["logout"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[]}},"response":[{"id":"e2393f84-6ddb-4de7-a354-8114d39aa526","name":"Created","originalRequest":{"method":"DELETE","header":[],"url":"https://test-server.brapi.org/brapi/v1/logout"},"status":"Created","code":201,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{}"}],"_postman_id":"65487df2-8d44-4e18-9e7c-9af4453196ed"},{"name":"Deprecated List observation levels","id":"aae1f1f6-5cbf-4563-aaf0-8e152c15bc10","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[],"url":"https://test-server.brapi.org/brapi/v1/observationLevels?page=&pageSize=","description":"

** DEPRECTED ** Use /observationlevels\nCall to retrieve the list of supported observation levels. Observation levels indicate the granularity level at which the measurements are taken. The values are used to supply the observationLevel parameter in the observation unit details call.

\n","urlObject":{"path":["observationLevels"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"1ea620fb-7caf-4566-a266-0ed49cbbf2d7","name":"OK","originalRequest":{"method":"GET","header":[],"url":{"raw":"https://test-server.brapi.org/brapi/v1/observationLevels?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["observationLevels"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 11,\n \"totalPages\": 6\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n \"plot\",\n \"plant\"\n ]\n }\n}"}],"_postman_id":"aae1f1f6-5cbf-4563-aaf0-8e152c15bc10"},{"name":"Get the Observation Levels","id":"6770cdfc-74e2-48d0-8457-df5d8ffef31d","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/observationlevels?page=&pageSize=","description":"

Call to retrieve the list of supported observation levels. \nObservation levels indicate the granularity level at which the measurements are taken. \nThe values are used to supply the observationLevel parameter in the observation unit details call.

\n","urlObject":{"path":["observationlevels"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

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HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/observationunits?germplasmDbId=&observationVariableDbId=&studyDbId=&locationDbId=&trialDbId=&programDbId=&seasonDbId=&observationLevel=&observationTimeStampRangeStart=&observationTimeStampRangeEnd=&page=&pageSize=","description":"

Get a set of observation units

\n","urlObject":{"path":["observationunits"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

The unique ID of a germplasm (accession) to filter on

\n","type":"text/plain"},"key":"germplasmDbId","value":""},{"description":{"content":"

The unique ID of an observation variable

\n","type":"text/plain"},"key":"observationVariableDbId","value":""},{"description":{"content":"

The unique ID of a studies to filter on

\n","type":"text/plain"},"key":"studyDbId","value":""},{"description":{"content":"

The unique ID of a location where these observations were collected

\n","type":"text/plain"},"key":"locationDbId","value":""},{"description":{"content":"

The unique ID of a trial to filter on

\n","type":"text/plain"},"key":"trialDbId","value":""},{"description":{"content":"

The unique ID of a program to filter on

\n","type":"text/plain"},"key":"programDbId","value":""},{"description":{"content":"

The year or Phenotyping campaign of a multi-annual study (trees, grape, ...)

\n","type":"text/plain"},"key":"seasonDbId","value":""},{"description":{"content":"

The type of the observationUnit. Returns only the observation unit of the specified type; the parent levels ID can be accessed through observationUnitStructure.

\n","type":"text/plain"},"key":"observationLevel","value":""},{"description":{"content":"

Timestamp range start

\n","type":"text/plain"},"key":"observationTimeStampRangeStart","value":""},{"description":{"content":"

Timestamp range end

\n","type":"text/plain"},"key":"observationTimeStampRangeEnd","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

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Technician\",\n \"observationDbId\": \"1\",\n \"observationTimeStamp\": \"2013-06-15T02:03:51.000Z\",\n \"observationVariableDbId\": \"MO_123:100002\",\n \"observationVariableName\": \"Plant height\",\n \"season\": \"fall 2011\",\n \"value\": \"1.2\"\n },\n {\n \"collector\": \"A. Technician\",\n \"observationDbId\": \"2\",\n \"observationTimeStamp\": \"2013-06-15T02:04:51.000Z\",\n \"observationVariableDbId\": \"MO_123:100006\",\n \"observationVariableName\": \"Virus severity\",\n \"season\": \"fall 2011\",\n \"value\": \"4.5\"\n }\n ],\n \"plantNumber\": null,\n \"plotNumber\": \"1\",\n \"programName\": \"Program 1\",\n \"replicate\": \"0\",\n \"studyDbId\": \"1001\",\n \"studyLocation\": \"Peru\",\n \"studyLocationDbId\": \"1\",\n \"studyName\": \"Study 1\",\n \"treatments\": [\n {\n \"factor\": \"water regimen\",\n \"modality\": \"deficit\"\n }\n ]\n },\n {\n \"X\": \"1\",\n \"Y\": \"1\",\n \"blockNumber\": \"101\",\n \"entryNumber\": \"1\",\n \"entryType\": \"FILLER\",\n \"germplasmDbId\": \"4\",\n \"germplasmName\": \"Name004\",\n \"observationLevel\": \"plant\",\n \"observationLevels\": \"block:101;plot:5;plant:5\",\n \"observationUnitDbId\": \"10\",\n \"observationUnitName\": \"Plant 5\",\n \"observationUnitXref\": [],\n \"observations\": [\n {\n \"collector\": \"B. Tech\",\n \"observationDbId\": \"16\",\n \"observationTimeStamp\": \"2011-06-15T02:06:51.000Z\",\n \"observationVariableDbId\": \"MO_123:100002\",\n \"observationVariableName\": \"Plant height\",\n \"season\": \"winter 2012\",\n \"value\": \"100\"\n },\n {\n \"collector\": \"B. Tech\",\n \"observationDbId\": \"17\",\n \"observationTimeStamp\": \"2011-06-15T02:07:51.000Z\",\n \"observationVariableDbId\": \"MO_123:100003\",\n \"observationVariableName\": \"Carotenoid\",\n \"season\": \"winter 2012\",\n \"value\": \"9\"\n },\n {\n \"collector\": \"B. 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HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/ontologies?page=&pageSize=","description":"

Call to retrieve a list of observation variable ontologies available in the system.

\n","urlObject":{"path":["ontologies"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"8aaf6516-935f-48ca-8a0e-26f37c4d40e1","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/ontologies?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["ontologies"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"8cf84e57-b16f-4b29-8bda-6279079f78fd","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/ontologies?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["ontologies"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"ab2d97f9-4a3a-4998-a6af-e4a86351e0c7","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/ontologies?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["ontologies"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 1,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"authors\": \"Bob\",\n \"copyright\": \"2017 Ontology.org\",\n \"description\": \"Ontology.org\",\n \"documentationURL\": \"https://ontology.org\",\n \"licence\": \"Apache\",\n \"ontologyDbId\": \"MO_123\",\n \"ontologyName\": \"Ontology.org\",\n \"version\": \"17\"\n }\n ]\n }\n}"},{"id":"fb077e9a-0709-4126-bd4f-8ae8adc18754","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/ontologies?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["ontologies"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""}],"_postman_id":"ae9c933c-faa9-42a0-9e8d-e6ea53dcb05c"},{"name":"Add new Observation Unit Phenotypes","id":"9d5f114e-0de4-47cf-9499-6ba39f167f85","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"POST","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"data\": [\n {\n \"observatioUnitDbId\": \"\",\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n }\n ],\n \"studyDbId\": \"\"\n },\n {\n \"observatioUnitDbId\": \"\",\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n }\n ],\n \"studyDbId\": \"\"\n }\n ]\n}"},"url":"https://test-server.brapi.org/brapi/v1/phenotypes?format=","description":"

Notes:

\n

Along with the study specific phenotype saving calls (in the observationUnit and table formats), this call allows phenotypes to be saved and images to optionally be transferred as well.

\n

Call to invoke for saving the measurements (observations) collected\\nfrom field for all the observation units.

\n

Observation timestamp should be ISO 8601 https://www.w3.org/TR/NOTE-datetime

\n

In case where JSON data is zipped for faster transfer speed (as in the case of the IRRI handheld implementation), the zipped JSON file will be listed in datafiles. The zipped file contains a JSON file with the same structure as the BrAPI call. In this case a format parameter should be passed as well.

\n

Images can be optionally be uploaded using this call by providing a zipfile of all images in the datafiles, along with the actual zipfile in multi-part form data.\"

\n","urlObject":{"path":["phenotypes"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

In case where JSON data is zipped for faster transfer speed (as in the case of the IRRI handheld implementation), the zipped JSON file will be listed in datafiles. The zipped file contains a JSON file with the same structure as the BrAPI call.

\n","type":"text/plain"},"key":"format","value":""}],"variable":[]}},"response":[{"id":"606c3772-1196-4dc7-ad00-4ea402926b95","name":"OK","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"data\": [\n {\n \"observatioUnitDbId\": \"\",\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n }\n ],\n \"studyDbId\": \"\"\n },\n {\n \"observatioUnitDbId\": \"\",\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n }\n ],\n \"studyDbId\": \"\"\n }\n ]\n}"},"url":{"raw":"https://test-server.brapi.org/brapi/v1/phenotypes?format=","host":["https://test-server.brapi.org/brapi/v1"],"path":["phenotypes"],"query":[{"key":"format","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 0,\n \"totalCount\": 0,\n \"totalPages\": 0\n },\n \"status\": []\n },\n \"result\": {\n \"observations\": [\n {\n \"observationDbId\": \"bb989815-86bf-430b-9d87-054df8919767\",\n \"observationUnitDbId\": \"1\",\n \"observationVariableDbId\": \"MO_123:100002\"\n }\n ]\n }\n}"},{"id":"94f345cc-205b-4051-9f28-769c48409844","name":"Forbidden","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"data\": [\n {\n \"observatioUnitDbId\": \"\",\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n }\n ],\n \"studyDbId\": \"\"\n },\n {\n \"observatioUnitDbId\": \"\",\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n }\n ],\n \"studyDbId\": \"\"\n }\n ]\n}"},"url":{"raw":"https://test-server.brapi.org/brapi/v1/phenotypes?format=","host":["https://test-server.brapi.org/brapi/v1"],"path":["phenotypes"],"query":[{"key":"format","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"b5c32f94-7ad3-4801-80cc-d788c807503f","name":"Bad Request","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"data\": [\n {\n \"observatioUnitDbId\": \"\",\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n }\n ],\n \"studyDbId\": \"\"\n },\n {\n \"observatioUnitDbId\": \"\",\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n }\n ],\n \"studyDbId\": \"\"\n }\n ]\n}"},"url":{"raw":"https://test-server.brapi.org/brapi/v1/phenotypes?format=","host":["https://test-server.brapi.org/brapi/v1"],"path":["phenotypes"],"query":[{"key":"format","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"ea689ef7-722b-4f98-81c0-73a91bcea7cf","name":"Unauthorized","originalRequest":{"method":"POST","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""},{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"data\": [\n {\n \"observatioUnitDbId\": \"\",\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n }\n ],\n \"studyDbId\": \"\"\n },\n {\n \"observatioUnitDbId\": \"\",\n \"observations\": [\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n },\n {\n \"collector\": \"\",\n \"observationTimeStamp\": \"\",\n \"observationVariableDbId\": \"\",\n \"observationVariableName\": \"\",\n \"value\": \"\",\n \"observationDbId\": \"\",\n \"season\": \"\"\n }\n ],\n \"studyDbId\": \"\"\n }\n ]\n}"},"url":{"raw":"https://test-server.brapi.org/brapi/v1/phenotypes?format=","host":["https://test-server.brapi.org/brapi/v1"],"path":["phenotypes"],"query":[{"key":"format","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""}],"_postman_id":"9d5f114e-0de4-47cf-9499-6ba39f167f85"},{"name":"Get the breeding Programs","id":"74086c02-f7c9-41d7-ad90-c63ade19a3ae","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/programs?commonCropName=&programName=&abbreviation=&page=&pageSize=","description":"

Call to retrieve a list of programs.

\n","urlObject":{"path":["programs"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Filter by the common crop name. Exact match.

\n","type":"text/plain"},"key":"commonCropName","value":""},{"description":{"content":"

Filter by program name. Exact match.

\n","type":"text/plain"},"key":"programName","value":""},{"description":{"content":"

Filter by program abbreviation. Exact match.

\n","type":"text/plain"},"key":"abbreviation","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"33726f89-159f-4585-a54d-13ed5c061925","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/programs?commonCropName=&programName=&abbreviation=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["programs"],"query":[{"key":"commonCropName","value":""},{"key":"programName","value":""},{"key":"abbreviation","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"56e38724-bcbc-4dab-8828-c576b523d1cc","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/programs?commonCropName=&programName=&abbreviation=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["programs"],"query":[{"key":"commonCropName","value":""},{"key":"programName","value":""},{"key":"abbreviation","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"cb193352-dece-40b4-bff2-71fb550d9d51","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/programs?commonCropName=&programName=&abbreviation=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["programs"],"query":[{"key":"commonCropName","value":""},{"key":"programName","value":""},{"key":"abbreviation","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""},{"id":"fe1624f8-0c72-494c-ac9d-ad307a2a2198","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/programs?commonCropName=&programName=&abbreviation=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["programs"],"query":[{"key":"commonCropName","value":""},{"key":"programName","value":""},{"key":"abbreviation","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 2,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"abbreviation\": \"P1\",\n \"commonCropName\": \"Tomatillo\",\n \"documentationURL\": \"https://brapi.org\",\n \"leadPerson\": \"Name Nameson\",\n \"leadPersonDbId\": \"person1\",\n \"leadPersonName\": \"Name Nameson\",\n \"name\": \"Program 1\",\n \"objective\": \"Global Population Improvement\",\n \"programDbId\": \"1\",\n \"programName\": \"Program 1\"\n },\n {\n \"abbreviation\": \"P2\",\n \"commonCropName\": \"Tomatillo\",\n \"documentationURL\": \"https://brapi.org\",\n \"leadPerson\": \"Name Nameson\",\n \"leadPersonDbId\": \"person1\",\n \"leadPersonName\": \"Name Nameson\",\n \"name\": \"Program 2\",\n \"objective\": \"XYZ\",\n \"programDbId\": \"2\",\n \"programName\": \"Program 2\"\n }\n ]\n }\n}"}],"_postman_id":"74086c02-f7c9-41d7-ad90-c63ade19a3ae"},{"name":"Search Programs","id":"394bf708-9691-4424-9e7b-f3915e74ff27","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"POST","header":[{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"abbreviation\": \"\",\n \"leadPerson\": \"\",\n \"name\": \"\",\n \"objective\": \"\",\n \"page\": \"\",\n \"pageSize\": \"\",\n \"programDbId\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/programs-search","description":"

DEPRECATED in v1.3 - see /search/programs

\n","urlObject":{"path":["programs-search"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[],"variable":[]}},"response":[{"id":"1d112088-388d-41f3-96a6-fcf2ce848213","name":"OK","originalRequest":{"method":"POST","header":[{"key":"Content-Type","value":"application/json"}],"body":{"mode":"raw","raw":"{\n \"abbreviation\": \"\",\n \"leadPerson\": \"\",\n \"name\": \"\",\n \"objective\": \"\",\n \"page\": \"\",\n \"pageSize\": \"\",\n \"programDbId\": \"\"\n}"},"url":"https://test-server.brapi.org/brapi/v1/programs-search"},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 2,\n \"totalPages\": 1\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"abbreviation\": \"P1\",\n \"commonCropName\": \"Tomatillo\",\n \"documentationURL\": \"https://brapi.org\",\n \"leadPerson\": \"Name Nameson\",\n \"leadPersonDbId\": \"person1\",\n \"leadPersonName\": \"Name Nameson\",\n \"name\": \"Program 1\",\n \"objective\": \"Global Population Improvement\",\n \"programDbId\": \"1\",\n \"programName\": \"Program 1\"\n },\n {\n \"abbreviation\": \"P2\",\n \"commonCropName\": \"Tomatillo\",\n \"documentationURL\": \"https://brapi.org\",\n \"leadPerson\": \"Name Nameson\",\n \"leadPersonDbId\": \"person1\",\n \"leadPersonName\": \"Name Nameson\",\n \"name\": \"Program 2\",\n \"objective\": \"XYZ\",\n \"programDbId\": \"2\",\n \"programName\": \"Program 2\"\n }\n ]\n }\n}"}],"_postman_id":"394bf708-9691-4424-9e7b-f3915e74ff27"},{"name":"Get the Seasons","id":"8a525ff9-e18b-40ca-8d39-400090041f84","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/seasons?seasonDbId=&season=&year=&page=&pageSize=","description":"

Call to retrive all seasons in the database.

\n

A season is made of 2 parts

\n
    \n

  • The primary year

    \n
    • \n

  • A term which defines a segment of the year. \nThis could be a traditional season, like \"Spring\" or \"Summer\"; \nthis could be a month, like \"May\" or \"June\"; \nor this could be an arbitrary season name which is meaningful to the breeding program like \"PlantingTime_3\" or \"Season E\"

    \n
    • \n
\n","urlObject":{"path":["seasons"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

The unique identifier for a season

\n","type":"text/plain"},"key":"seasonDbId","value":""},{"description":{"content":"

The term to describe a given season. Example \"Spring\" OR \"May\" OR \"PlantingTime7\"

\n","type":"text/plain"},"key":"season","value":""},{"description":{"content":"

The 4 digit year of a season. Example \"2017\"

\n","type":"text/plain"},"key":"year","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"372a603d-531b-4ac2-9a0a-cdb0fd74fdf0","name":"Forbidden","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/seasons?seasonDbId=&season=&year=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["seasons"],"query":[{"key":"seasonDbId","value":""},{"key":"season","value":""},{"key":"year","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Forbidden","code":403,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - User does not have permission to perform this action\""},{"id":"bf06ee20-2122-43ac-b630-b49a1154dbc3","name":"OK","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/seasons?seasonDbId=&season=&year=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["seasons"],"query":[{"key":"seasonDbId","value":""},{"key":"season","value":""},{"key":"year","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 10,\n \"totalPages\": 5\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"season\": \"fall\",\n \"seasonDbId\": \"1\",\n \"year\": \"2011\"\n },\n {\n \"season\": \"winter\",\n \"seasonDbId\": \"2\",\n \"year\": \"2012\"\n }\n ]\n }\n}"},{"id":"e206fc17-5533-4a1f-b993-8d764d22d5a8","name":"Unauthorized","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/seasons?seasonDbId=&season=&year=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["seasons"],"query":[{"key":"seasonDbId","value":""},{"key":"season","value":""},{"key":"year","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Unauthorized","code":401,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Missing or expired authorization token\""},{"id":"f245f3ee-922f-4ef5-b5d7-de7cf7577a52","name":"Bad Request","originalRequest":{"method":"GET","header":[{"description":{"content":"HTTP HEADER - Token used for Authorization \n\nBearer {token_string} ","type":"text/plain"},"key":"Authorization","value":"\"\""}],"url":{"raw":"https://test-server.brapi.org/brapi/v1/seasons?seasonDbId=&season=&year=&page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["seasons"],"query":[{"key":"seasonDbId","value":""},{"key":"season","value":""},{"key":"year","value":""},{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"Bad Request","code":400,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"\"ERROR - 2018-10-08T20:15:11Z - Malformed JSON Request Object\\nERROR - 2018-10-08T20:15:11Z - Invalid query parameter\\nERROR - 2018-10-08T20:15:11Z - Required parameter is missing\""}],"_postman_id":"8a525ff9-e18b-40ca-8d39-400090041f84"},{"name":"Deprecated List study types","id":"7a7d897b-e738-43be-84f0-9669445b02db","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[],"url":"https://test-server.brapi.org/brapi/v1/studyTypes?page=&pageSize=","description":"

** DEPRECTED ** Use /studytypes\nCall to retrieve the list of study types.\nScope: PHENOTYPING. Implementation target date: PAG2016

\n","urlObject":{"path":["studyTypes"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

\n","type":"text/plain"},"key":"page","value":""},{"description":{"content":"

The size of the pages to be returned. Default is 1000.

\n","type":"text/plain"},"key":"pageSize","value":""}],"variable":[]}},"response":[{"id":"089c9148-c9d9-4d16-8924-65cf6e266505","name":"OK","originalRequest":{"method":"GET","header":[],"url":{"raw":"https://test-server.brapi.org/brapi/v1/studyTypes?page=&pageSize=","host":["https://test-server.brapi.org/brapi/v1"],"path":["studyTypes"],"query":[{"key":"page","value":""},{"key":"pageSize","value":""}]}},"status":"OK","code":200,"_postman_previewlanguage":"Text","header":[{"key":"Content-Type","value":"application/json"}],"cookie":[],"responseTime":null,"body":"{\n \"metadata\": {\n \"datafiles\": [],\n \"pagination\": {\n \"currentPage\": 0,\n \"pageSize\": 2,\n \"totalCount\": 3,\n \"totalPages\": 2\n },\n \"status\": []\n },\n \"result\": {\n \"data\": [\n {\n \"description\": \"Description for Nursery study type\",\n \"name\": \"Crossing Nursery\",\n \"studyTypeDbId\": \"1\",\n \"studyTypeName\": \"Crossing Nursery\"\n },\n {\n \"description\": \"Description for yield study type\",\n \"name\": \"Yield study\",\n \"studyTypeDbId\": \"2\",\n \"studyTypeName\": \"Yield study\"\n }\n ]\n }\n}"}],"_postman_id":"7a7d897b-e738-43be-84f0-9669445b02db"},{"name":"Get the Study Types","id":"0df9d3ca-4c3f-4036-8270-0271eadf0b85","protocolProfileBehavior":{"disableBodyPruning":true},"request":{"auth":{"type":"bearer","bearer":{"basicConfig":[]},"isInherited":false},"method":"GET","header":[{"key":"Authorization","value":"\"\"","description":"

HTTP HEADER - Token used for Authorization

\n

Bearer {token_string}

\n"}],"url":"https://test-server.brapi.org/brapi/v1/studytypes?studyTypeDbId=&page=&pageSize=","description":"

Call to retrieve the list of study types.

\n","urlObject":{"path":["studytypes"],"host":["https://test-server.brapi.org/brapi/v1"],"query":[{"description":{"content":"

Filter based on study type unique identifier

\n","type":"text/plain"},"key":"studyTypeDbId","value":""},{"description":{"content":"

Which result page is requested. The page indexing starts at 0 (the first page is 'page'= 0). Default is 0.

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The size of the pages to be returned. Default is 1000.

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Search observation variables. \nSee Search Services for additional implementation details.

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